Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq49069 111 2e-19 seq49392 95.1 2e-14 >seq49069 Length=388 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || | || || || || ||||| | ||||| || || | || Sbjct 226 TGCAAATCTTCGTAAAGACCCTTACTGGTAAGACCATTACCCTCGATGTCGAGCAAAGCG 167 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| || | ||| || || ||| ||||| || ||||| || || | Sbjct 166 ACACTATTGACAATGTCAAGACTAAGATTCAGGATAAGGAAGGTATCCCACCAGACCAGC 107 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||||||||| || || || || ||| | || || ||||| | |||||||||| | Sbjct 106 AAAGACTCATCTTCGCTGGAAAGCAACTTGAGGACGGAAGAACTCTCTCAGATTATAACA 47 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || ||||| || | || || || | || | |||||||| Sbjct 46 TCCAGAAGGAATCTACCCTTCACTTGGTCCTCAGACTCAGAGGAGG 1 >seq49392 Length=484 Score = 95.1 bits (104), Expect = 2e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | || ||||| | ||| || ||| |||||||| |||||||| || || Sbjct 483 GACACCATTGACAACGTAAAGACTAAGATTCAAGACAAAGAAGGTATTCCACCAGACCAG 424 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||||||||| || || || || ||| | || ||| ||||| || | || ||||| Sbjct 423 CAAAGACTCATCTTCGCTGGAAAGCAACTTGAGGATGGCAGAACCTTGTCCGACTATAAC 364 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || ||||||||| || ||||||| || || || | ||||| || Sbjct 363 ATCCAAAAAGAAAGTACCCTCCATTTGGTCTTGAGACTCAGAGGTGG 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785610315024040