Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq49069 89.7 4e-13 seq49392 86.0 5e-12 >seq49069 Length=388 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| ||||| || ||||| || || ||||||||||| | | || | || Sbjct 16 AGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAGAGAGTTCTTCCGTCC 75 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || ||||| | || | ||||||||| || || || ||||| || || || Sbjct 76 TCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCC 135 Query 29695 TGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || || |||||| | || | |||||| | || || || || || || || Sbjct 136 TG-AATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACATCGAGGGTAATGGT 194 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| | ||| || || || || ||||| || Sbjct 195 CTTACCAGTAAGGGTCTTTACGAAGATTTGCATATT 230 >seq49392 Length=484 Score = 86.0 bits (94), Expect = 5e-12 Identities = 97/129 (75%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| || || ||||||||| |||||||| || | | ||| | ||| || Sbjct 335 ACCAAATGGAGGGTACTTTCTTTTTGGATGTTATAGTCGGACAAGGTTCTGCCATCCTCA 394 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| || ||||| | || | ||||||||| || || |||||||| ||||||||||| Sbjct 395 AGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATACCTTCTTTGTCTTG- 453 Query 29698 AATTTTTGT 29706 ||| || || Sbjct 454 AATCTTAGT 462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384953532013767