Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq49069 167 5e-36 seq53863 149 1e-30 seq741 127 4e-24 seq10326 125 1e-23 seq49392 109 1e-18 seq12826 104 5e-17 seq2010 98.7 2e-15 seq11334 96.9 7e-15 >seq49069 Length=388 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | | || || ||||| || |||||||| ||||| || |||||||| || Sbjct 1 CCTCCTCTGAGTCTGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAG 60 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| |||| ||||| || ||||| |||||||| ||||| |||||||| || ||||| || Sbjct 61 AGAGTTCTTCCGTCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGG 120 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||| |||||||| | || ||||| ||||| || || | | || || Sbjct 121 ATACCTTCCTTATCCTGAATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACA 180 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || || | |||||||| || || ||||| Sbjct 181 TCGAGGGTAATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCAT 227 >seq53863 Length=275 Score = 149 bits (164), Expect = 1e-30 Identities = 133/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||||||| | || || ||||| || || ||||| || || || || || ||||| Sbjct 109 CCACCTCTCAATCTGAGGACCAAGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAG 168 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| |||| |||||||| | ||| |||||||| ||||| | |||||| ||||||||||| Sbjct 169 AGAGTTCTTCCGTCTTCCAATTGCTTTCCAGCGAAGATCAATCTTTGCTGATCTGGAGGA 228 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATC 82750 || |||||||||||||| ||||| | ||||| || ||||| ||||| Sbjct 229 ATACCTTCCTTATCTTGGATCTTGGTCTTTACGTTGTCAATAGTATC 275 >seq741 Length=354 Score = 127 bits (140), Expect = 4e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 82619 TTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 82678 ||||||||| ||||| || || || | |||| || || || ||||| |||||||| || Sbjct 2 TTCTTTCTGAATATTGTAGTCTGACAATGTTCTTCCATCCTCAAGTTGCTTTCCAGCGAA 61 Query 82679 GATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATT 82738 ||| |||||||| || ||||| || || ||||||||||| |||||||| | || || || Sbjct 62 GATAAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGAATCTTGGTCTTGACGTT 121 Query 82739 TTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 ||||| || || | | || || || | ||| || ||||| || || | ||||| || Sbjct 122 GTCAATAGTGTCGCTCTGCTCGACATCAAGAGTAATAGTCTTTCCAGTGAGGGTCTTCAC 181 Query 82799 AAATATCTGCATTATTAT 82816 || || ||||| |||| Sbjct 182 GAAGATTTGCATATTTAT 199 >seq10326 Length=2715 Score = 125 bits (138), Expect = 1e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| ||||| | ||||| || ||||| || || || ||||| || |||| |||||| Sbjct 2332 AGAACCAAGTGAATTGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCGTCT 2391 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| |||||||||||||| || ||||| || || | || |||||||| | || Sbjct 2392 TCAAGTTGCTTTCCAGCAAAGATGAGCCTTTGCTGGTCAGCTGGAATTCCTTCTCTCTCC 2451 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || ||||| | || | | ||||| |||||| | || || || | || || ||| Sbjct 2452 TGCATCTTGGTCTTGATTGTGTCAATTGTATCAGATTGCTCGACATCGAGGGTCATTGTC 2511 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || ||||| ||||| ||||| || ||||| Sbjct 2512 CTACCAGTCAAGGTCTTAACAAAGATTTGCAT 2543 >seq49392 Length=484 Score = 109 bits (120), Expect = 1e-18 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | | || || || || || ||| |||||| || || ||||| || || Sbjct 317 CCACCTCTGAGTCTCAAGACCAAATGGAGGGTACTTTCTTTTTGGATGTTATAGTCGGAC 376 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | |||| || || || ||||| |||||||| ||||| |||||||| || ||||| || Sbjct 377 AAGGTTCTGCCATCCTCAAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGA 436 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCA 82751 || ||||| || ||||||||||| | ||||| || ||||| || ||| Sbjct 437 ATACCTTCTTTGTCTTGAATCTTAGTCTTTACGTTGTCAATGGTGTCA 484 >seq12826 Length=774 Score = 104 bits (114), Expect = 5e-17 Identities = 176/262 (67%), Gaps = 30/262 (11%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| | | || || | ||| ||||| || || ||||| || || || || || Sbjct 332 ACCGCCTCTGAGTCTGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 273 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || |||| || ||||| | ||| ||||||||||| |||| |||||| || ||||| || Sbjct 272 GAGGGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAAATTAATCTTTGCTGGTCTGGTGG 213 Query 82703 TATTCCTTCCTTATCTTGAATCTT--TGCT----------------------------TT 82732 || ||||| |||||||| ||||| | || || Sbjct 212 AATACCTTCTTTATCTTGGATCTTAGTCCTACACAAATATTGTAAGGTAAGCACTTACTT 153 Query 82733 TACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGT 82792 ||||| || || ||||| | | || || || | ||| |||||||||||||| | || Sbjct 152 GACATTGTCGATAGTATCGCTCTGCTCGACGTCAAGAGTAATCGTCTTGCCTGTAAGAGT 93 Query 82793 CTTTACAAATATCTGCATTATT 82814 ||| || || |||||||||||| Sbjct 92 CTTGACGAAAATCTGCATTATT 71 >seq2010 Length=934 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| | | || || | ||| ||||| || || ||||| || || ||||| || Sbjct 368 ACCACCTCTGAGTCTGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGA 309 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || |||| || ||||| | ||| ||||| ||||| |||| |||||| || || || || Sbjct 308 GAGGGTTCTTCCATCTTCCAATTGCTTTCCTGCAAAAATTAATCTTTGCTGGTCAGGTGG 249 Query 82703 TATTCCTTCCTTATCTTGAATCTT 82726 || |||||||||||||| || || Sbjct 248 GATACCTTCCTTATCTTGGATTTT 225 >seq11334 Length=3448 Score = 96.9 bits (106), Expect = 7e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||||||||| || ||| || |||| |||||||| ||||||||||| |||||||| ||| Sbjct 2115 TCTTCTAGTTGGTTGCCACCATAGATGAGTCTTTGCTGATCTGGAGGAATTCCTTCTTTA 2056 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| || ||| | || ||| || || || | ||||| | ||| || Sbjct 2055 TCTTGGATAAAGCATTTCAGATCAAAAATAGTGTCTGCAGTATTGACTTCAATAGTGATA 1996 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCT 82806 ||||||||||||| ||||| ||| | |||| Sbjct 1995 GTCTTGCCTGTCAGAGTCTTCACATAAATCT 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981115354722993