Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq53863 89.7 3e-13 seq2010 84.2 1e-11 >seq53863 Length=275 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | | ||||| || || || || ||||| |||||||| || ||| Sbjct 109 CCACCTCTCAATCTGAGGACCAAGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCAGAG 168 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | |||| |||||||| ||||| || || ||||| | ||||||||| | || Sbjct 169 AGAGTTCTTCCGTCTTCCAATTGCTTTCCAGCGAAGATCAATCTTTGCTGATCTGGAGGA 228 Query 33643 ACACCTTCTTTGTC 33656 | |||||| || || Sbjct 229 ATACCTTCCTTATC 242 >seq2010 Length=934 Score = 84.2 bits (92), Expect = 1e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| | | | || | || |||||| ||| || || ||||||||||||| Sbjct 369 CACCACCTCTGAGTCTGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGG 310 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 |||| || | | | || |||||||| ||||| |||||||| || | ||||| || | | Sbjct 309 AGAGGGTTCTTCCATCTTCCAATTGCTTTCCTGCAAAAATTAATCTTTGCTGGTCAGGTG 250 Query 33641 GCACACCTTCTTTGTC 33656 | | |||||| || || Sbjct 249 GGATACCTTCCTTATC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328477307951040