Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12826 107 5e-18 seq49392 100 7e-16 seq2010 98.7 2e-15 >seq12826 Length=774 Score = 107 bits (118), Expect = 5e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| ||| || ||| |||||| | || || || |||||| Sbjct 189 AAGATCCAAGATAAAGAAGGTATTCCACCAGACCAGCAAAGATTAATTTTTGCTGGAAAG 248 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||||||||| || | |||| |||||| ||||||| ||||| ||||| ||| Sbjct 249 CAATTGGAAGATGGAAGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 308 Query 206374 CTTGTTTTGAGACT 206387 || || | ||||| Sbjct 309 CTCGTCCTCAGACT 322 >seq49392 Length=484 Score = 100 bits (110), Expect = 7e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||||||||| |||||||| ||| || ||| |||||||| |||||| Sbjct 468 GTAAAGACTAAGATTCAAGACAAAGAAGGTATTCCACCAGACCAGCAAAGACTCATCTTC 409 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||| | || ||||| || || ||| |||| || ||| |||| ||||| | Sbjct 408 GCTGGAAAGCAACTTGAGGATGGCAGAACCTTGTCCGACTATAACATCCAAAAAGAAAGT 349 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 || || || | || |||||||| Sbjct 348 ACCCTCCATTTGGTCTTGAGACT 326 >seq2010 Length=934 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || ||||| || ||||| || || ||| |||||| | || || || |||||| Sbjct 225 AAAATCCAAGATAAGGAAGGTATCCCACCTGACCAGCAAAGATTAATTTTTGCAGGAAAG 284 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||||||||| || | ||||||||||| ||||||| ||||| ||||| ||| Sbjct 285 CAATTGGAAGATGGAAGAACCCTCTCCGATTACAACATCCAGAAGGAGTCCACTCTCCAC 344 Query 206374 CTTGTTTTGAGACT 206387 || || | ||||| Sbjct 345 CTCGTCCTCAGACT 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180963955175627