Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq11536 134 2e-25 >seq11536 Length=1331 Score = 134 bits (148), Expect = 2e-25 Identities = 402/609 (66%), Gaps = 30/609 (5%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 ||||| |||| | || ||||| ||| | || ||||||||||| |||| ||| || Sbjct 1035 GAGCCTATGCTTCAGGACAACCCTAACAGGTTCGTCCTGTTCCCAATCCAGTACAAGGAT 976 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 | ||||| |||||| || ||| | || | ||| ||| | ||||||| ||||||| Sbjct 975 GTCTGGGAGATGTAC-AAGAAGCAGCAAGCTTGCTTCTGGGTAGTCGAGGAGATCGACCT 917 Query 1455836 CGGCGCCGACACGGTCCACTGGG-TGTC--GCTGAGCGACGACGAGCGCCATTTCATCAA 1455892 | | ||| ||||| || | ||| | || || || | || ||||| || Sbjct 916 TGCATCAGACCTCAAAGACTGGAATGACAAGCTCAATGATGATGAAAGACACTTCATTAA 857 Query 1455893 GCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCC 1455952 | |||| || ||||| ||| || || || || ||||| ||||||| || | Sbjct 856 GTACGTTCTTGCCTTCTTT-GCTGCTTCAGACGGTATCGTCCTCGAGAACTTGATTGAGA 798 Query 1455953 GCTT----TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 ||| | |||| |||||| | ||||| | | | || ||||| ||||| | Sbjct 797 ACTTCGCTTCTGAA----GTCCAAGTACCAGAAGTGAGATGCTTCTACGGATTCCAAAGT 742 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || |||||||| ||| |||||||| |||||||| || ||||| | | ||| Sbjct 741 ATGATGGAGAACATCCATAGTGAGACCTACTCCCTCCTGATTGATACCTATATTAGTGAC 682 Query 1456069 CCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACAC----GGTGCCGTCGGTGAGGAA 1456124 ||||| || |||||| || || || | | | ||||| | || Sbjct 681 GAACAAGAGAAAGATTTCCTCTTCAAAGCTATTGAAAATATTGATACCGTC----AAAAA 626 Query 1456125 AAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACA-CTTTGCCGAGCG 1456183 ||||| || ||||| || || |||||||||||| || ||| | ||| || || | Sbjct 625 GAAGGCTGAATGGGCTATTAAATGGATCAACAAG-AG-----CGATAGCTTCGCTGAAAG 572 Query 1456184 GCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTT 1456242 |||| ||| ||||||| | ||||| || ||||||||||| || || ||||| ||||| Sbjct 571 GCTCATCGCCTTTGCCTGTGTCGAAGGAATCTTTTTCTCCGGATCATTTTGCGCAATCTT 512 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTC 1456302 ||||||||| ||| | | ||||| || ||| ||||| |||||||| ||| | Sbjct 511 TTGGCTCAAAAAGAGATCTTTGATGCCAGGACTT-TGCTTCTCTAACGAATTGATCTCTA 453 Query 1456303 GCGACGAAG 1456311 | || |||| Sbjct 452 GAGATGAAG 444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7172353279843094