Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq29984 122 7e-23 seq17286 111 1e-19 >seq29984 Length=2719 Score = 122 bits (134), Expect = 7e-23 Identities = 261/387 (67%), Gaps = 5/387 (1%) Strand=Plus/Minus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 ||||||| | | ||||| | || | ||| | || | | ||||||| |||||| ||| Sbjct 1248 GGACATTGGTTTGGACAAAAGAGGGTCCAGTCACCATCTTCCTCAACTCTCTTCATGAAC 1189 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 ||||| ||||| | || || |||| ||||| ||| | || |||||| |||| || Sbjct 1188 AAATCACAGACCCAAAGAGCATAGAACAAGTCTCTTGCTCTGTTTTCTTCTTTACC-ATG 1130 Query 131723 Attttt-ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 || || || ||| | ||||| || | ||||| || ||||| ||||| | ||| || || Sbjct 1129 GTTCTTCTTTAAACTCAAAAACTCATAGATGTCTGCGTGCCAAGGTTCGAGATAGACGGC 1070 Query 131782 CATTGCGCCTTTGCGCTTACCGCCT---TGATTAACATGACGAACCATGTTGTTGTATAC 131838 | || ||||| | |||||| ||| || | |||| | | | ||||||| || || Sbjct 1069 AAAAGCTCCTTTTCTCTTACCACCTCCTTGGTCGACATATCTAGCAGTGTTGTTATAGAC 1010 Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898 | | ||| || | | || || | | ||||||| |||| | |||||| | | Sbjct 1009 CCTGAGCATTGGGACTACTCCATTAGAGATTCCATTAGTGCCTCTGATGTAGGAGGATGT 950 Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCA 131958 |||||||| || | ||||||||||| || ||| |||||||| | || || Sbjct 949 AGCTCTGATGCAATGGATAGCAAGTCCAATACCACCTGCGTTCTTAGAGATAATGGCACA 890 Query 131959 TTTGGTTAGAGTGTTATAGATACCTTC 131985 | | ||||||| |||||| ||||| Sbjct 889 CTGTTTGAGAGTGTCATAGATTCCTTC 863 >seq17286 Length=2746 Score = 111 bits (122), Expect = 1e-19 Identities = 242/358 (68%), Gaps = 11/358 (3%) Strand=Plus/Minus Query 131635 GCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATC 131694 ||| | || |||||||| |||||| |||| || ||||| | ||||| |||| || Sbjct 1216 GCCATCCTCTTCAACTCTCTTCATGAACAGGTCTCAGACCCACATAGCGTAGAACAAGTC 1157 Query 131695 TCTAGCTTTTTTCTCTTCTGTACCCATAAtt-tttttCAAATTTAAAAAGTCCAAAATGT 131753 ||| ||| | || || ||| |||| || || ||||| | || || || || | || | Sbjct 1156 TCTTGCTCTGTTTTCATCTTTACC-ATGGTTCTTTTTGAGGTTCAAGAACTCATAGATAT 1098 Query 131754 CCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTACCGCCT---TGAT 131810 | |||||||| ||||| | ||| | || | |||||||| | |||||||||| || | Sbjct 1097 CTGCATGCCATGGTTCGAGATAGATGGCGAAGGCGCCTTTTCTCTTACCGCCTCCTTGGT 1038 Query 131811 TAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTC 131870 ||||| | | | | ||| | || || | ||||||| |||| || || | || Sbjct 1037 CAACATATCTTGCAGTATCATTGAAGACTCGAAGCATGGGCACCAATCCATTAGAACGTC 978 Query 131871 CATTGGTGCTCTTAATGTAGCTGCCATTGGC---TCTGATTTTGTGAACGTTGAGTCCAA 131927 | ||||| | ||||||| ||||| |||||| |||||| ||||||| Sbjct 977 CGTTGGTTCCTCTAATGTAAGA---ATTGGTCGATCTGATGCAGTGAACAGCAAGTCCAA 921 Query 131928 TACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTC 131985 |||||||| | | |||||||| | || |||| | | |||| |||||| || || Sbjct 920 TACCTCCGGCATTCTTAGAGATAATAGCACATTGCTTCAATGTGTCATAGATTCCATC 863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424641342264744