Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq17286 118 1e-21 seq29984 105 8e-18 >seq17286 Length=2746 Score = 118 bits (130), Expect = 1e-21 Identities = 663/1052 (63%), Gaps = 22/1052 (2%) Strand=Plus/Minus Query 118525 CATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAG 118584 |||| ||||||||||| || || | ||||| || | | ||| | || || | || Sbjct 1709 CATCAGCGAGACCTTGAACTCCAATTCCAATGGGTCTGTTTCTGAAGTTTGAATATTCAG 1650 Query 118585 CGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 118643 | ||| | | || ||| | || |||| ||||| ||||| | || || |||| | Sbjct 1649 CC-TCTGGAACTGGGTAATAGTTATTATCAATAACTCTATTCAAGTTCTTAGTGATGGTC 1591 Query 118644 TTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCATTGACATACTT 118702 | || | |||||| ||| | || || || || || | |||||||||||| || | Sbjct 1590 CTGGTTACTTCATGGAGCCTATCATAGTCGAACACACCT----TCTTCATTGACAAACCT 1535 Query 118703 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 118762 | | || || || || |||||||| |||| || ||||||||| ||||| || || Sbjct 1534 TGCCAAGGAAATAGATGCAAGATTACAAACAGCAACCTGATCCTTATCTGTGTATTCCAT 1475 Query 118763 AATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 118822 |||||| ||| | |||||| ||||| || || || | || | || || || || | Sbjct 1474 AATTTCACAGCAGAGGTTTGAGCTCTTGATAGTTCCAAGATTTTGCTGGTTAGATTTCCT 1415 Query 118823 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 118882 || | || || || ||||||||||| || ||||| | ||||| | | ||| Sbjct 1414 ATTGGCAGAGTCTTTATAGAGCATGTATGGGACACCGGTCTCGATCTGGGATTCAATAAT 1355 Query 118883 AGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTC---GCCCCTCTTCCTCGTA 118939 || ||||||| | ||| ||||| ||| ||| || ||||| || || Sbjct 1354 TGCGTTCCAGAGGTGTTGAGCCTTTACAGT---CTTGACTCCTTTACCTTCTTCTTCATA 1298 Query 118940 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATC 118999 | || || | |||||| ||||| ||| || | | || || || || Sbjct 1297 TTGAGTATACAATTTTTCAAATTCTTCTCCCCAACTTTCAAACAATCCAGGGCACTCATT 1238 Query 119000 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059 || |||||||| | ||| | ||| |||| ||||| | ||||||||| |||||| || Sbjct 1237 CGGACAGAAGAGGGTCCAGTTGCCATCCTCTTCAACTCTCTTCATGAACAGGTCTCAGAC 1178 Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 119119 ||| | || |||| | || | | ||| || | || || || | Sbjct 1177 CCACATAGCGTAGAACAAGTCTCTTGCTCTGTTTTCATCTTTACCATGGTTCTTTTTGAG 1118 Query 119120 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 119179 | ||| || || |||||| || ||||| ||||| || || | |||| | || || Sbjct 1117 GTTCAAGAACTCATAGATATCTGCATGCCATGGTTCGAGATAGATGGCGAAGGCGCCTTT 1058 Query 119180 AC---GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 | || || | |||| ||||| || ||||| | || || || |||||||| || Sbjct 1057 TCTCTTACCGCCTCCTTGGTCAACATATCTTGCAGTATCATTGAAGACTCGAAGCATGGG 998 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 119296 | | |||| || | || || || || | ||| ||| || | | ||||| Sbjct 997 CACCAATCCATTAGAACGTCCGTTGGTTCCTCTAATGTAAGAATTGGTCGATCTGATGCA 938 Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||| | | |||||||| || || ||| ||||| || || | | | | | Sbjct 937 GTGAACAGCAAGTCCAATACCTCCGGCATTCTTAGAGATAATAGCACATTGCTTCAATGT 878 Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416 | | ||||| ||||| || || ||| || |||||| | |||||| |||||| Sbjct 877 GTCATAGATTCCATCTATAGAATCATCCCGCATTGCGAGCAAGAAGCAAGAACTCATTTG 818 Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCTTGGG 119475 || | || || || | |||||| | || || || || ||| |||| ||| ||| Sbjct 817 TGGTTTTGGAGTTCCTGAGTTGAACAAGGTAGGAGTAGCATGGGTGAACCAT---TTGTT 761 Query 119476 A--CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGA 119533 | |||| ||| || ||||| ||| | | ||| || | | ||| ||||| || || Sbjct 760 ACTCATCAAGTCATAAGTCTCAAAGGCAGACTCAATATCCTTCTTGTGGATACCAATAGA 701 Query 119534 GACCCGCATAAACATGTATTGGGGTGTTTCCA 119565 ||| | ||| | ||| || ||| |||||| Sbjct 700 GACTCTCATCAGCATTGTCTGTGGTCTTTCCA 669 >seq29984 Length=2719 Score = 105 bits (116), Expect = 8e-18 Identities = 497/778 (64%), Gaps = 16/778 (2%) Strand=Plus/Minus Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 118670 || ||||| ||||| | ||| ||||| | | | |||| | ||||||||||| ||| Sbjct 1623 TCAATAACTCTATTCAAATTCTTGGTAATAGTCCTTGTAACAGAGTGAAGCTTTTCATAA 1564 Query 118671 TCAAA-ACTGCGAGTCTCTTCATTGACATAC-TTAGGAAGGGCGATTGACGCCAGATTAC 118728 || || ||| | || |||||||| || ||| || | || || ||||| || | Sbjct 1563 TCGAAGACTCCT----TCATCATTGACGAACCTTACTAAAGAA-ATAGATGCCAGGTTGC 1509 Query 118729 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCT 118788 | |||| | ||| |||||||| || || |||| || ||| | || || || | Sbjct 1508 AGACAGCTACTTGATCTTTATCAGTATATTCCATAACCTCACAGCAAAGATTCGAGCTTT 1449 Query 118789 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 118848 | || || || | |||| |||||| || || |||| | ||||| || ||||||| Sbjct 1448 TGATAGTTCCAAGATTCTGTTGATTAGATTTCTTGTTGGCAGAGTCCTTATAGAGCATGT 1389 Query 118849 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT-CGGCAGCTGGC 118907 |||| ||| ||||| | ||||| | | |||||| ||||| | || | || || | Sbjct 1388 ATGGAACCCCTGTCTCAATCTGGGATTCAATAATAGCATTCCAAAGATGCTGCGCCTTG- 1330 Query 118908 ACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 118967 | || || || || |||| ||| || || || || || | ||| || |||||| Sbjct 1329 ATTGTTTTCTTTCCTTTGCCTTCTTGCTCATATTTAGTATAAAGTGTTTCGAATTCTTCA 1270 Query 118968 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 119027 ||| | || | | ||||| | | ||| || ||||| | ||| | |||| | Sbjct 1269 CCCCAGCATTCAAACAATCCTGGACATTGGTTTGGACAAAAGAGGGTCCAGTCACCATCT 1210 Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087 |||||||| | ||||||||| | || || ||| || || |||| | || | Sbjct 1209 TCCTCAACTCTCTTCATGAACAAATCACAGACCCAAAGAGCATAGAACAAGTCTCTTGCT 1150 Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147 | |||||| | || || || || |||||| || ||| || |||||| Sbjct 1149 CTGTTTTCTTCTTTACCATGGTTCTTCTTTAAACTCAAAAACTCATAGATGTCTGCGTGC 1090 Query 119148 CACGGTTCCAGGTACACCGCGATTGACCCCTTAC---GACGACCAGCCTGGTTTACATAC 119204 || ||||| || || || || | | || || | || ||| | |||| ||||| Sbjct 1089 CAAGGTTCGAGATAGACGGCAAAAGCTCCTTTTCTCTTACCACCTCCTTGGTCGACATAT 1030 Query 119205 CTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT- 119263 || |||||| |||| | || | |||||||| | | |||| || ||||| || Sbjct 1029 CTAGCAGTGTTGTTATAGACCCTGAGCATTGGGACTACTCCATTAGAGATTCCATTAGTG 970 Query 119264 CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTG 119322 || | || || ||| | | ||||||| ||||| | |||||||| |||| Sbjct 969 CCTCTGATGTAGGAGGAT--GTAGCTCTGATGCAATGGATAGCAAGTCCAATACCACCTG 912 Query 119323 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC 119380 | ||| ||||| || |||| ||||| || | ||||| || || || || || Sbjct 911 CGTTCTTAGAGATAATGGCACACTGTTTGAGAGTGTCATAGATTCCTTCAATAGAATC 854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617997757591720