Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq46144 82.4 6e-11 >seq46144 Length=480 Score = 82.4 bits (90), Expect = 6e-11 Identities = 162/235 (69%), Gaps = 11/235 (5%) Strand=Plus/Minus Query 111708 TAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCA 111767 || ||||| || ||||| || ||||| |||||||| | | |||||| || || | Sbjct 267 TAGAGGCTCGATATGATTCTTGTATACATGTGCATCTCCAAGAGTATGGATGAACTCTC- 209 Query 111768 AGGCTC---CAAACCAGTGATG-TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAA 111823 ||| ||| || | | || || | ||| |||| || | |||||| ||||||| Sbjct 208 ---CTCTTTCAAGCCCGCATAGCTGAGCCAATATGCATGTCAGCAAACTGTAGCTAGCAA 152 Query 111824 TGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT 111883 |||| || || || || ||||| ||||||| ||| ||||| | |||||| || ||| Sbjct 151 TGTTGAACGGAACTCCAAGGCCGATATCTCAGCTTCTCTGATACATCTGACAAGAAAGTC 92 Query 111884 TATTTT--GTG-ACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 | || | ||| |||||| ||||| | || | ||||| || || || ||||| Sbjct 91 TGTTCTCAGTGTCCACATAGAATTGGGAGAGAATGTGACATGGCGGTAAAGCCAT 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391675293124681