Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq11536 93.3 5e-14 >seq11536 Length=1331 Score = 93.3 bits (102), Expect = 5e-14 Identities = 327/506 (65%), Gaps = 15/506 (3%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||||||||| |||||||| || || || |||| || ||||| | | ||| Sbjct 443 CCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAAAGTCCTGGCATCAAAGATCTCTTT 502 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 || | ||||||||| || || || || || ||| ||||| ||||||||||| |||||| Sbjct 503 TTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAAAAGATTCCTTCGACACAGGCAAAG 562 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCG---GAAGTCATCCAAGTCTGAGCCCATTCA 74945 |||| || | || ||||| | | |||| | ||||| | |||||||||| Sbjct 563 GCGATGAGCCTTTCAGCGAA-GCT--ATCGCTCTTGTTGATCCATTTAATAGCCCATTCA 619 Query 74946 GCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCG 75005 || || |||||| | | | | | || || |||| ||||||| | ||||||| Sbjct 620 GCCTTCTTTTTGACGGTATCAATATTTTCAATAGCTTTGAAGAGGAAATCTTTCTCTTGT 679 Query 75006 GGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTG 75065 || | | | ||||||| || ||||| ||||| ||| || ||| | Sbjct 680 TCGTCACTAATATAGGTATCAATCAGGAGGGAGTAGGTCTCACTATGGATGTTCTCCATC 739 Query 75066 AACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTC 75125 | ||| | ||||||| | | | | |||| | || || || | || ||| Sbjct 740 ATACTTTGGAATCCGTAGAAGCATCTCACTTCTGGTACTTGGACTTCAGAAGCGAAGTTC 799 Query 75126 ATGTCGAT---ATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATT 75182 || || ||||| | |||||| ||||| || || || || || || || || Sbjct 800 ---TCAATCAAGTTCTCGAGGACGATACCGTCTGAAGCAGCAAAGAAGGCAAGAACGTAC 856 Query 75183 TTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTC---CCAATCCTTCAGGTCCCCCGCC 75239 || || ||||| | ||||| ||| |||| ||||| ||| || || ||||| || Sbjct 857 TTAATGAAGTGTCTTTCATCATCATTGAGCTTGTCATTCCAGTCTTTGAGGTCTGATGCA 916 Query 75240 AAATCAATCTCCTCGACCGTCCAGAA 75265 | || ||||||||||| |||||| Sbjct 917 AGGTCGATCTCCTCGACTACCCAGAA 942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546828933602600