Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq52342 86.0 6e-12 >seq52342 Length=1312 Score = 86.0 bits (94), Expect = 6e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 34227 TGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGA 34286 |||| || || ||| ||||||||||| || || ||||| ||||| |||||||| | | Sbjct 951 TGCTCACAACCAAAGATGTGTACTGGAGAGGAGTTGTCGAAGAGCTCTTGTGGTTCCTAA 1010 Query 34287 GGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACG 34346 || | ||| ||| ||||| | ||| | | || ||||||||||||| | | Sbjct 1011 AAGGAGACACCAACTCCAAGAACCTCAGCGACAAGAAAGTAAAGATCTGGGACGGAAATG 1070 Query 34347 GGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCC 34406 | ||| |||| || || || | | || || | | || || || ||| | || | Sbjct 1071 GCTCTAGAGAATTCCTCGATCAATGTGGCTTTACTGACAGAGAAGAAGGTGACCTCGGGC 1130 Query 34407 CGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 | || ||||| ||||||||||||||||| || || |||| Sbjct 1131 CTGTTTACGGTTTCCAGTGGAGACACTTCGGAGCTCAGTA 1170 Score = 86.0 bits (94), Expect = 6e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 |||| || || ||||||||||||||||| ||||| || || || | ||| || || || Sbjct 1170 TACTGAGCTCCGAAGTGTCTCCACTGGAAACCGTAAACAGGCCCGAGGTCACCTTCTTCT 1111 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | || || | | || || || |||| ||| || | ||||||||||||| Sbjct 1110 CTGTCAGTAAAGCCACATTGATCGAGGAATTCTCTAGAGCCATTTCCGTCCCAGATCTTT 1051 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCC 7078 || | | ||| | ||||| ||| ||| | || | | |||||||| ||||| Sbjct 1050 ACTTTCTTGTCGCTGAGGTTCTTGGAGTTGGTGTCTCCTTTTAGGAACCACAAGAGCTCT 991 Query 7079 TCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCA 7118 ||||| || || ||||||||||| ||| || || |||| Sbjct 990 TCGACAACTCCTCTCCAGTACACATCTTTGGTTGTGAGCA 951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447945327194640