Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq46144 107 2e-18 >seq46144 Length=480 Score = 107 bits (118), Expect = 2e-18 Identities = 234/344 (68%), Gaps = 11/344 (3%) Strand=Plus/Minus Query 118358 TGTAGTTTTCCAAAATAAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGT 118417 |||| ||||| | | | |||||| || |||| ||||| |||| | | |||||||||| Sbjct 376 TGTAATTTTCAAGAGTGAAATCTGAGAAAGTAAATTCTTCGATATCTGTAATATCCTTGT 317 Query 118418 TTATGGATAG-TGTGGGAAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCA 118476 | || || || ||||| || || | ||| | | || || || ||||| Sbjct 316 TAATCTTTAACTGAGGGAAT-GGTTTTGGATACCTCTTCAACTGCTTCTTTAGAGGCTCG 258 Query 118477 ATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGC 118536 || |||||| | || ||||| ||||| |||| ||||| ||||| || || | |||| Sbjct 257 ATATGATTCTTGTATACATGTGCATCTCCAAGAGTATGGATGAACTCTCCTCTTTCAAGC 198 Query 118537 CCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACA 118596 || || ||||| | ||| |||||| |||||||||||| || | || || ||||| Sbjct 197 CCGCATAGCTGAGCCAATATGCATGTCAGCAAACTGTAGCTAGCAATGTTGAACGGAACT 138 Query 118597 CCCAGACCCATGTCT--GCTGATCTCTGGTACAATTGGCAAGAGA----GCTCCCCGTTT 118650 || || || || ||| ||| |||||| |||| || ||||| | | || | || | Sbjct 137 CCAAGGCCGATATCTCAGCT--TCTCTGATACATCTGACAAGAAAGTCTGTTCTCAGTGT 80 Query 118651 GCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 | ||||| || || | ||||||||||| || | | |||| Sbjct 79 -CCACATAGAATTGGGAGAGAATGTGACATGGCGGTAAAGCCAT 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414190954391068