Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq52342 102 7e-17 >seq52342 Length=1312 Score = 102 bits (112), Expect = 7e-17 Identities = 157/223 (70%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| || ||||||||||| ||||| || || || ||||| || ||||| |||| | Sbjct 1160 CGAAGTGTCTCCACTGGAAACCGTAAACAGGCCCGAGGTCACCTTCTTCTCTGTCAGTAA 1101 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 |||| | | || | || ||||| || || || |||||||||||||||| ||| | Sbjct 1100 AGCCACATTGATCGAGGAATTCTCTAGAGCCATTTCCGTCCCAGATCTTTACTTTCTTGT 1041 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194 || ||| | |||||||| ||| ||| | | |||||||| ||||| || || || Sbjct 1040 CGCTGAGGTTCTTGGAGTTGGTGTCTCCTTTTAGGAACCACAAGAGCTCTTCGACAACTC 981 Query 30195 CCTTCCAAAAGACCCTCTTGGTCGTGAGGA-GGGGAAACTGTC 30236 | |||| | || ||||| ||||| | ||||| ||||| Sbjct 980 CTCTCCAGTACACATCTTTGGTTGTGAGCATTGGGAAGCTGTC 938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405883087899082