Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq49069 123 6e-23 seq741 118 2e-21 seq2010 105 2e-17 seq49392 93.3 1e-13 seq10326 89.7 1e-12 seq12826 87.8 4e-12 >seq49069 Length=388 Score = 123 bits (136), Expect = 6e-23 Identities = 164/226 (73%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 |||||||||||||| | ||||| ||||| || || |||||||| ||||| | | |||| Sbjct 7 CTGAGTCTGAGGACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCTGAGAGAGTT 66 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 || || || || || ||||| || |||||||| || || |||||||| | | ||| | Sbjct 67 CTTCCGTCCTCAAGTTGCTTT--CCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGGATAC 124 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 ||||||| || ||||| || |||||| | || | |||| ||| || || | Sbjct 125 CTTCCTTATCCTGAATCTTAGTCTTGACATTGTCAATAGTGTCGCTTTGCTCGACATCGA 184 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| || || || || || ||||| ||||||| ||||| || Sbjct 185 GGGTAATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCATATT 230 >seq741 Length=354 Score = 118 bits (130), Expect = 2e-21 Identities = 147/197 (75%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 151914 TCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGA 151971 ||||| || || ||||| || | || ||||| ||||| || || ||||| || |||| Sbjct 3 TCTTTCTGAATATTGTAGTCTGACAATGTTCTTCCATCCTCAAGTTGCTTT--CCAGCGA 60 Query 151972 AGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAG 152031 ||||||| || |||||||| | | ||| |||||||| || ||||| || ||||| Sbjct 61 AGATAAGTCTTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGAATCTTGGTCTTGACGT 120 Query 152032 TCTCTACGCTGTCTGAACT-CTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090 | || | |||| | || ||| || |||||||||||||| || || ||||| |||||| Sbjct 121 TGTCAATAGTGTC-GCTCTGCTCGACATCAAGAGTAATAGTCTTTCCAGTGAGGGTCTTC 179 Query 152091 ACGAAGACCTGCATTTT 152107 ||||||| ||||| || Sbjct 180 ACGAAGATTTGCATATT 196 >seq2010 Length=934 Score = 105 bits (116), Expect = 2e-17 Identities = 108/139 (78%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 |||||||||||||| || || ||||| ||||| || |||||||||||||||| | ||| Sbjct 361 CTGAGTCTGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGAGAGGGTT 302 Query 151944 CTCCCATCTTCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 || |||||||| | ||||| || || || || | || |||||||| | | ||| | Sbjct 301 CTTCCATCTTCCAATTGCTTT--CCTGCAAAAATTAATCTTTGCTGGTCAGGTGGGATAC 244 Query 152002 CTTCCTTTTCTTGAATTTT 152020 ||||||| ||||| ||||| Sbjct 243 CTTCCTTATCTTGGATTTT 225 >seq49392 Length=484 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 |||||||| | ||| | ||| || ||| |||||||||||||| || |||| || ||| Sbjct 323 CTGAGTCTCAAGACCAAATGGAGGGTACTTTCTTTTTGGATGTTATAGTCGGACAAGGTT 382 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 || ||||| || || ||||| || |||||||| || || |||||||| | | || | Sbjct 383 CTGCCATCCTCAAGTTGCTTT--CCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATAC 440 Query 152002 CTTCCTTTTCTTGAATTTT 152020 |||| || |||||||| || Sbjct 441 CTTCTTTGTCTTGAATCTT 459 >seq10326 Length=2715 Score = 89.7 bits (98), Expect = 1e-12 Identities = 154/222 (69%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 151885 TGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTC 151944 |||||||||| || | |||| |||||||| || ||||||||||| || | | |||| Sbjct 2324 TGAGTCTGAGAACCAAGTGAATTGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTC 2383 Query 151945 TCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | || ||||| || ||||| || || ||||| ||||| |||||||| || | ||||| Sbjct 2384 TTCCGTCTTCAAGTTGCTTT--CCAGCAAAGATGAGCCTTTGCTGGTCAGCTGGAATTCC 2441 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||| | || || || || |||| || || | | || || ||| || || || Sbjct 2442 TTCTCTCTCCTGCATCTTGGTCTTGATTGTGTCAATTGTATCAGATTGCTCGACATCGAG 2501 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | || || | ||||| || |||| ||||| Sbjct 2502 GGTCATTGTCCTACCAGTCAAGGTCTTAACAAAGATTTGCAT 2543 >seq12826 Length=774 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/139 (75%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 |||||||||||||| || || ||||| ||||| || ||||||||||| |||| | ||| Sbjct 325 CTGAGTCTGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTT 266 Query 151944 CTCCCATCTTCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 || |||||||| | ||||| || || || || | || |||||||| | | || | Sbjct 265 CTTCCATCTTCCAATTGCTTT--CCAGCAAAAATTAATCTTTGCTGGTCTGGTGGAATAC 208 Query 152002 CTTCCTTTTCTTGAATTTT 152020 |||| || ||||| || || Sbjct 207 CTTCTTTATCTTGGATCTT 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152984255761877