Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq49392 105 1e-17 seq10326 105 1e-17 seq53863 95.1 3e-14 >seq49392 Length=484 Score = 105 bits (116), Expect = 1e-17 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| ||| | || ||||||||||||||||| ||||| | |||| || | ||||||||| Sbjct 335 ACCAAATGGAGGGTACTTTCTTTTTGGATGTTATAGTCGGACAAG-GTTCTGCCATCCTC 393 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 ||||| || || || ||||| | | ||| ||||| |||||||| || |||||||| Sbjct 394 AAGTTGCTTTCCAGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATACCTTCTTTGTCTTG 453 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTC 283039 ||||| | |||||| | || || ||||| Sbjct 454 AATCTTAGTCTTTACGTTGTCAATGGTGTC 483 >seq10326 Length=2715 Score = 105 bits (116), Expect = 1e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||||| || || | || || || ||||| || || |||||| Sbjct 2353 TCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCGTCTTCAAGTTGCTTTCCAGCAAAG 2412 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | ||| |||||| | ||||| || || | || || ||||| | || | || Sbjct 2413 ATGAGCCTTTGCTGGTCAGCTGGAATTCCTTCTCTCTCCTGCATCTTGGTCTTGATTGTG 2472 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || || || || ||||| ||||| || || ||| |||| ||||| |||||||| Sbjct 2473 TCAATTGTATCAGATTGCTCGACATCGAGGGTCATTGTCCTACCAGTCAAGGTCTTAACA 2532 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 2533 AAGATTTGCAT 2543 >seq53863 Length=275 Score = 95.1 bits (104), Expect = 3e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| || || | || || || | ||| || || || || Sbjct 144 TTCCTTTTGGATGTTGTAGTCAGAGAGAGTTCTTCCGTCTTCCAATTGCTTTCCAGCGAA 203 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||| || || |||||||| ||||| ||||||||||| | |||||| | Sbjct 204 GATCAATCTTTGCTGATCTGGAGGAATACCTTCCTTATCTTGGATCTTGGTCTTTACGTT 263 Query 283028 ATCGATAGTGTC 283039 || ||||| || Sbjct 264 GTCAATAGTATC 275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045980292163898