Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moneuplotes_20crassus_20[genbank_20GCA_5F001880385.1_202016-11-17] 56,587 sequences; 58,566,570 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq11536 138 1e-27 >seq11536 Length=1331 Score = 138 bits (152), Expect = 1e-27 Identities = 308/462 (67%), Gaps = 3/462 (1%) Strand=Plus/Plus Query 23506 AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTT 23565 || || || |||||| || || |||||||| ||| |||||||| ||||| || Sbjct 419 AAGCAAGCGAAATCAGTGTGAAGTCCTTCATCTCTAGAGATCAATTCGTTAGAGAAGCAA 478 Query 23566 AATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAG 23625 | ||||||||| || || ||||| | |||||| ||||| |||||||||||| || Sbjct 479 AGTCCTGGCATCAAAGATCTCTTTTTGAGCCAAAAGATTGCGCAAAATGATCCGGAGAAA 538 Query 23626 AAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCA 23685 || || || || ||| |||||||| | || | | | | || | | | | | Sbjct 539 AAGATTCCTTCGACACAGGCAAAGGCGATGAGCCTTTCAGCGAAGCTATCGCTCTTGTTG 598 Query 23686 GAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745 |||||||| | | ||| | ||||||| ||| || ||||| ||||||| ||| Sbjct 599 ---ATCCATTTAATAGCCCATTCAGCCTTCTTTTTGACGGTATCAATATTTTCAATAGCT 655 Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805 || ||||| ||| ||| |||| | || | ||||| |||||||| || | || Sbjct 656 TTGAAGAGGAAATCTTTCTCTTGTTCGTCACTAATATAGGTATCAATCAGGAGGGAGTAG 715 Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 | ||| ||| || || || || | | || || || || || ||||| |||| | Sbjct 716 GTCTCACTATGGATGTTCTCCATCATACTTTGGAATCCGTAGAAGCATCTCACTTCTGGT 775 Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 | ||| || ||| | || | | | || || ||| || ||||| || |||| Sbjct 776 ACTTGGACTTCAGAAGCGAAGTTCTCAATCAAGTTCTCGAGGACGATACCGTCTGAAGCA 835 Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 23967 |||||||| |||||||| || || || || |||||||||||| Sbjct 836 GCAAAGAAGGCAAGAACGTACTTAATGAAGTGTCTTTCATCA 877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521119131981800