Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq7876 134 1e-26 >seq7876 Length=4354 Score = 134 bits (148), Expect = 1e-26 Identities = 312/465 (67%), Gaps = 9/465 (2%) Strand=Plus/Minus Query 97008 TGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATA 97067 ||||||||| || || | |||| | |||| || | |||| ||||| ||| Sbjct 1591 TGGGAAAGGATATGGGTATCTCTTAAGTTACTCTTGAAGTGGTTCAACATGATTTTTATA 1532 Query 97068 AATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTG-ACATGGG 97126 | |||||||| ||||| ||||| || ||||| | |||| | || || | Sbjct 1531 TACATGAGCATCACCTAATACATGAATGAACTCTCCTCTCT-TCAATCCGCACACTTGTG 1473 Query 97127 CGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATAT 97186 | | ||| || ||||| | ||||| || |||||||| ||||| | || || ||||||| Sbjct 1472 CAAGCATGCAGGTTAACAATGAATAACTCGCAATGTTGAAAGGAATACCAAGACCCATAT 1413 Query 97187 CAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCAT---CACACACATAAAACTGAC 97243 || ||||||||||| | || |||||||||||||||| || | |||||||| | | Sbjct 1412 CACAAGATCTTTGATACATTTGGCAGGAAAGCTTTCCATCAGCAGAAACATAAAATTAAG 1353 Query 97244 TCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACA 97303 || | || ||||| || | ||||| ||| || ||| | |||||||||| || Sbjct 1352 CTAAAATGTGGCAGGGAGGAAGAGCCATGTTTTTAAGATCAGCAGCGTTCCAAGCACTCA 1293 Query 97304 TCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA--TCTGCTTTAATTG 97361 ||| |||||||| ||||| || | | | |||||| | || || |||| Sbjct 1292 TCACAATTCTTCTGCTTGTTGGATTGTTCTTCAACTGATTAATGACGTCAGC--CAATTA 1235 Query 97362 ATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCT 97421 |||| |||| ||| |||| || | | || ||| | |||||||| || || Sbjct 1234 GTCAAATCCTTTTCCTGTGTAATCGTCGTGCATTGTTTCATAAGCAGCTCCAAAGTGTCT 1175 Query 97422 CCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATC 97466 ||||| ||| ||||| || || || || || | ||||||||||| Sbjct 1174 CCATTAGAACCCATAGACTGGCCCGAGATCCCACTCTTCTCTATC 1130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346689484345910