Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq22269 87.8 1e-12 seq21020 84.2 1e-11 >seq22269 Length=1399 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 || || || |||| || | |||| ||||||||| ||||||||||| || || | | Sbjct 868 AGTCTGAGGACCAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGAAAGAGTTCTG 809 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || || | ||||| || ||||| ||||| | || || ||| || | | ||| Sbjct 808 CCATCTTCAAGTTGCTTTCCGGCGAAGATGAGTCTTTGTTGATCGGGTGGGATACCTTCC 749 Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351 ||||| |||||| ||| | || | || | ||| | | |||||||||| ||| Sbjct 748 TTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTATCTGAAGGCTCGACGTCCAAGGTG 689 Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || ||||| || || || || ||||| ||||| Sbjct 688 ATGGTCTTTCCGGTAAGGGTCTTGACGAAGATTTGCAT 651 >seq21020 Length=1175 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || | | |||| |||||||| || || |||||| Sbjct 409 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCTGCCGTCTTCCAACTGTTTTCCAGCGAAA 350 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| | ||| || ||| || | | ||| ||||| ||||| ||| | || Sbjct 349 ATGAGTCTCTGTTGATCGGGTGGGATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTT 290 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | | || || || | |||||||| ||||| |||||||| || || Sbjct 289 TCAATGGTATCTGATGGCTCAACATCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTAACG 230 Query 34379 AAGATCTGCAT 34389 || || | ||| Sbjct 229 AAAATTTACAT 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322983947029280