Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2801 104 3e-17 >seq2801 Length=1577 Score = 104 bits (114), Expect = 3e-17 Identities = 148/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||| ||||| | || ||||| ||||| |||||| || ||| Sbjct 612 GCAAAGTCAGTGTGCATACCTTCGTCTCTTGAAATGAGCTCATTTGAGAAGGTGAGACCT 671 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||| | |||||| || | || || || || ||||||||||| Sbjct 672 GGCATGAGGCCACGCTTCTTAAGCCAGAAGATTGAGCAGAAGGATCCTGAGAAGAAGATG 731 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG-GAGCGCGACTTTGTGTCAAA 126225 ||||| | | ||||| |||| || | |||||| ||| ||||| | ||| Sbjct 732 CCCTCGATAGCAGCGAAAGCAATTAGTCTCTCAGCGAAGCTAGCGC----TCTCACCAAT 787 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTT 126252 |||||| || ||||| | ||||| || Sbjct 788 CCACTTAATGGCCCATTCAGCCTTCTT 814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597186617268040