Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq14470 248 7e-60 seq17691 212 5e-49 seq16114 132 4e-25 seq15026 113 3e-19 seq5415 102 6e-16 >seq14470 Length=2603 Score = 248 bits (274), Expect = 7e-60 Identities = 942/1459 (65%), Gaps = 37/1459 (3%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || |||||||| | ||| || |||||||| ||||| ||||| ||||| |||| ||| Sbjct 732 ATTCCGTTGGCATCAATATCGAAAGTGACTTCGATTTGTGGGACACCTCTGGGAGCGGGT 791 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| ||||| | || ||| | || || | ||||| || || | | || |||| Sbjct 792 GGGATACCTTCAAGGTTGAATTTACCGAGTAAGTGGTTATCCTTGGTCATTGATCTTTCA 851 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 || ||||| | ||| || || | | ||| || || | ||| || || || | | Sbjct 852 CCTTCGAAGACTTGAATCAAGACACCTGGTTGGTTGTCAGCATAGGTGGTGAAGATTTGT 911 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || || || || |||||||| ||| | | ||||| | ||| || || Sbjct 912 GACTTCTTGGTTGGGATGGTAGTGTTTCTTGGAATGAGAACAGTCATGACACCTCCAGCA 971 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATT-TTGAAGTTTTTC 517572 ||||| | ||| || || || || ||||| | |||| | || |||| ||| | Sbjct 972 GTTTCAATACCGGTTGAGAGTGGGGTAACATCCAAAAGGAGGAGATCCTTGACGTTGCTG 1031 Query 517573 ATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATC 517632 || || ||| |||||||| ||||| | |||||||| || |||||||||||||| Sbjct 1032 -TCTCCTTCTCCAGTGAGAATAGCAGCTTGGACGGCAGCACCGTAAGCAACAGCTTCATC 1090 Query 517633 AGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC 517692 || || | | | || || | || || ||||| || | || || | |||| || Sbjct 1091 TGGGTTGATTGATCTGTTAAGGGTCTTTCCGTTGAAGAAGTCGGAGAGCATTTGTTGAAC 1150 Query 517693 CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAG 517752 ||| || || | | ||| || ||||| || |||| ||| || | ||| || | || Sbjct 1151 CTTGGGGATTCTGGTTGAACCACCAACCAAGACAACTTCGTGGATTTGTCCCTTGGCGAG 1210 Query 517753 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACA 517812 ||| ||| | || ||||| |||||| | || ||| || | || ||| Sbjct 1211 GCCTGAGTCCTTAAGGACGTTTTCTACGGGTGGCATACATTTTCTGAAGAGATCCATACA 1270 Query 517813 AAGTTCTTCGAATTTAGCTCTAG---TAAGAGTGACATTATAATCAATTCCTTCGAACAA 517869 ||||| ||||| |||||||| | | ||||| || | || || || | ||| Sbjct 1271 GAGTTCCTCGAACTTAGCTCTTGAGATTTGAGTG---TTGAAGTCTTCACCCTC-AGCAA 1326 Query 517870 -AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 517928 || || |||||| | | |||| | || || || | || || || | Sbjct 1327 GAGTTTCGCATTCAATTGGGGCTTGATGGGCAGCTGAAAGAATTCTCTTTGCCTTCTCGC 1386 Query 517929 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC----TGATTGAT-TCAA-ATCTGTTTTAT 517982 || || || ||||||| | ||| | || ||||| |||| | | || || | Sbjct 1387 ATTGAGTTCTGAGTCTTCTGAGTGCTCTGGCGTTTCCGTTGATGTCAATACCAGTCTTCT 1446 Query 517983 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 518042 ||||||| || |||| || | ||||| | || || ||||||||||||| Sbjct 1447 ------TCTTGAATTCAGCAACGCAATAGTCGACAAGTCTGTTGTCGAAATCTTCACCTC 1500 Query 518043 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 518102 |||| | || | || || || | |||| ||| | || ||||||| | | | Sbjct 1501 CCAAATGGGTGTGACCGTTGGTGGCCTTAACTTCGAAGATACCTTCTTCAATGGTGAGGA 1560 Query 518103 GAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT-TTGTCT 518161 | | ||||| || |||||||| | ||| || || || || || ||||| ||| Sbjct 1561 GGGAGACATCGAAAGTACCACCACCGAGATCGAAGATGAGAACGTT--TTTCTCTTGGGA 1618 Query 518162 TGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 518220 || ||| || || | ||| || |||| ||| ||||||||||| || || || ||||| | Sbjct 1619 TGATTTCTTGTCCAAACCGTAAGCAATAGCGGCAGCAGTTGGCTCGTTGATGATTCTGAG 1678 Query 518221 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 518280 ||| || | ||| | || | || ||||| || ||||||||||| ||||| ||||| || Sbjct 1679 AACGTTCATACCTGAGATGGTACCAGCATCCTTGGTGGCTTGTCTCTGTGAGTCGTTGAA 1738 Query 518281 ATATGCAGGAACAGTAATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTTGCCG 518339 ||| || || ||||| ||||| || | | || ||||| || |||||| || Sbjct 1739 ATAAGCTGGGACAGTGATAACAGCGTTCTTGACAGTCTTT-GAAAGATAAGCTTCAGCGA 1797 Query 518340 TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATT 518399 ||| ||||| || | || | ||| ||||| |||| ||| | | | | ||||| || Sbjct 1798 TTTCCTTCATCTTGATCAAGACCATAGATGAGATTTCTTCAGCGTGGAACTTCTTGGCTT 1857 Query 518400 CATTTTGATATGATACTTCAAAATATGGTTTATTACC--AACATTAAT-AACTTTAAATG 518456 || | || || ||| ||| || | | | | || | || || |||| Sbjct 1858 CACCCTTGTAGTCGACAACAATGACTGGCTTGTCAGCTGGTCCTTGCTCGACCTTGAATG 1917 Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTG---GTCATTAAAATCTCTACCAATTAATC 518513 |||| | ||||| || ||||| |||| ||| || | ||| || || | || Sbjct 1918 GCCAATGCTTCATGTCGTCTTGAA---TTTGCTTCTCAGAGAATTTTCTTCCGATAAGTC 1974 Query 518514 GTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTC 518573 || || || || | || || | || || | ||| |||||| ||||||| |||| Sbjct 1975 TCTTGGCGTCGAAGACGGTGTTCTTGGGGTTTCTAGCAACTTGATTCTTGGCTGAGTCTC 2034 Query 518574 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 518633 |||| || ||| || || || | || ||||||||||| ||| || ||||||| Sbjct 2035 CAATAAGTCTCTCTTCTTCAGTGAAAGCGACGTATGATGGAGTGGTGTTGTTTCCTTGAT 2094 Query 518634 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 518693 | || | || ||||||||||| | || |||| |||||||| ||| |||| || | Sbjct 2095 CGTTGGGGATGATTTCAACTTTGTCGTTGAGCCACACACCTACGCAAGAGTAAGTGGTGC 2154 Query 518694 CTAAATCAATACCAATAGC 518712 | | ||| || |||||||| Sbjct 2155 CGAGATCTATTCCAATAGC 2173 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/152 (74%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 |||||||| |||| ||| || |||||||| || || || ||| | ||||| | | ||| Sbjct 1632 AAACCGTAAGCAATAGCGGCAGCAGTTGGCTCGTTGATGATTCTGAGAACGTTCATACCT 1691 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360 | || || ||| ||| || ||||||||||||| ||| || ||||| ||||| ||| Sbjct 1692 GAGATGGTACCAGCATCCTTGGTGGCTTGTCTCTGTGAGTCGTTGAAATAAGCTGGGACA 1751 Query 322361 GTAATAACTGCTTTATTAATAGGTTTTTGTAA 322392 || ||||| || || || | | || |||| || Sbjct 1752 GTGATAACAGCGTTCTTGACA-GTCTTTGAAA 1782 >seq17691 Length=2366 Score = 212 bits (234), Expect = 5e-49 Identities = 719/1109 (65%), Gaps = 17/1109 (2%) Strand=Plus/Plus Query 517284 CATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTT 517343 |||| | || || |||||||||||||| || || ||||| | || |||||||| || Sbjct 670 CATCGATTTCGAAAGTGACTTCAATTTGGGGAACTCCTCTTGGGGCGGGTGGGATACCAG 729 Query 517344 CCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAA 517403 | || ||| | || | || ||||| || || | ||| |||||| ||||| | Sbjct 730 TGAGATCGAATTTACCTAACAAATGGTTATCCTTGGTCATGGTTCTTTCACCTTCGAAGA 789 Query 517404 TTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTAC 517463 || || || || ||||| | ||| ||| || || || | || || || | Sbjct 790 CTTAAATGGTGACAGTTGTTTGTTGGTCTTGATAGGTGGTGAAGGTTTGAGACTTCTTTC 849 Query 517464 AAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAAC 517523 || || || ||| | || || |||||||| | ||| || | || || | || Sbjct 850 CTGGGATGACGGTACCTCTGTTGATGATCTTGGTCATGACACCTCCAACAGTCTCAATAC 909 Query 517524 CAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGAC 517583 | || | ||| || || ||||| | | | ||||| | | | ||| ||||| || Sbjct 910 CGAGGGTAAGTGGGGTTACATCGATCAAAAGAATATCCTTAGTCTCTTCTGAAGTTTCAC 969 Query 517584 CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAG 517643 | | | |||| | |||||| ||||| || || || || |||||||| || |||| | Sbjct 970 CTCCTAAAATACCACCTTGAACTGCAGCTCCGTAGGCGACGGCTTCATCTGGGTTAATAC 1029 Query 517644 TTTCATTTAGTTTTTTACCATTGAAAAAAT--TTGAAAGAAGTTGTCTTACCTTAGGAAT 517701 | ||| ||| || || ||||| |||| |||| | |||| ||||| || || Sbjct 1030 CTCTGTTTGGTTCCTTTCCGTTGAAGAAATCCTTGATTAA--TTGTTGAACCTTGGGGAT 1087 Query 517702 ACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATC 517761 | || ||| || ||||| | ||| | ||||| | | | ||| | || || ||| Sbjct 1088 TCTAGTTGAACCACCAACGAGTACGACTTCATCAATATCGGTTTTCTTCATACCTGCATC 1147 Query 517762 CAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTC 517821 | |||| || ||| |||| |||| | | ||||| || || | |||||| Sbjct 1148 GTCGAGGACTTATTGAACTGGTTAAAGAGTCTTCTTGAACAAATCATTGCATAATTCTTC 1207 Query 517822 GAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTC 517881 |||| ||||||| |||| || | | |||||| || || | | |||| | Sbjct 1208 GAATCTAGCTCTGGTAATGGTCTCGCTGAGATCAATACCGTCCATAAGGTTCTCAATTGA 1267 Query 517882 AATCGTAGTTTGAGTCGA-AGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTA 517940 || | | |||||| | || | || || | | || || |||| | | | |||| Sbjct 1268 AACCTTGGTTTGA-TGGACACTTGAAAGATCTCTCTTGGCCTTTTCAACTTCAGCTCTTA 1326 Query 517941 GTCTTCGT-AAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAA-TC 517998 |||| |||||| ||| | || | |||| | || | || |||||||| || Sbjct 1327 A-CTTCTAGAAGGCTCTTGGGTCGTCCTTGATATCTTTATTGTTCTTCTTCTTGAAAATC 1385 Query 517999 TTCAACACACCATGTTAC--AAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTT 518056 || | | |||| ||| | | ||| ||||||||||||||||| | |||| Sbjct 1386 TTAATGAAG---TGTTCAGTAAGTCTTTGATCGAAATCTTCACCTCCCAAATGGGTATCA 1442 Query 518057 CCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGG 518116 || ||||| || | ||||| ||||| |||| || | ||| | ||||| Sbjct 1443 CCGCTAGTAGCGACGACCTCGAAAACTCCATTATCAATAGTAAGAAGGGAGACATCGAAA 1502 Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 || || ||||| | ||| || | | | ||| | ||| |||| || || || | | Sbjct 1503 GTACCTCCACCAAGATCGAAGACGATAATGTTCTTCTCTC---CTTGCTTCTTGTCCATA 1559 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| |||| ||| ||||||||||| ||||| || ||||||||||||| |||||||| Sbjct 1560 CCATAGGCAATAGCTGCAGCAGTTGGCTCATTGATGATTCTCAAAACATCGAGACCAGCG 1619 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || || ||||| || || ||||||||||||||||| || |||||||| || ||||| Sbjct 1620 ATCAAACCGGCATCCTTGGTTGCTTGTCTTTGTGAATCATTGAAATATGCTGGGACAGTG 1679 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 ||||| |||| | || ||| |||| | ||| || || | | ||||| || | Sbjct 1680 ATAACTGCATGCTTAACGTCTCTACCGAGATAGGCTTCAGCAATCTCCTTCATCTTGATG 1739 Query 518357 AAAATCATTGATGAAATTTGTTCTGGGGA 518385 | |||||| | ||||| || |||||||| Sbjct 1740 AGAATCATAGCTGAAACTTCCTCTGGGGA 1768 Score = 98.7 bits (108), Expect = 8e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| || |||| |||||| |||||||| ||||| || ||| | | |||||| | ||| || Sbjct 1559 ACCATAGGCAATAGCTGCAGCAGTTGGCTCATTGATGATTCTCAAAACATCGAGACCAGC 1618 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 || | | | ||| ||||||||||| |||| ||||| ||||||||||| ||||| Sbjct 1619 GATCAAACCGGCATCCTTGGTTGCTTGTCTTTGTGAATCATTGAAATATGCTGGGACAGT 1678 Query 322363 AATAACTGCTTTATTAA 322379 |||||||| | |||| Sbjct 1679 GATAACTGCATGCTTAA 1695 >seq16114 Length=4999 Score = 132 bits (146), Expect = 4e-25 Identities = 216/311 (69%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 635447 CTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAATGTTATT 635506 || ||||| || || |||||||| || ||| | | || ||| |||||| | ||| || Sbjct 3481 CTTATTTTAACTGAAGGAGATTCTGCAAAATCTCTAGCAATGAGTGGTCTGTAAGTTGTT 3422 Query 635507 GGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCT 635566 || |||||| || ||||||||||||||| ||||||||| | || ||||| || ||| Sbjct 3421 GGCAGAGATCGTTTTGGAGTTTTCCCACTAAGAGGAAAATTATTAAATGTAAGAGATTGC 3362 Query 635567 AGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTT 635626 || || ||||| ||||| ||||| || | || | || || | || || Sbjct 3361 GGTATGAAGTAAATTTTAGATAACGAGGAGATCCAAAATATTATCAAGATACTCGGGCTA 3302 Query 635627 GAACAAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTT 635686 | || | | ||||||||||| || || |||||||| ||| |||||| | Sbjct 3301 TATATGGGTAGATAATATGATGATCTTAAGACATTGCGATATGGATCTATAATGATTATG 3242 Query 635687 GCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTTTATCCATTGT 635746 || ||| ||||| |||||| | |||||||| ||| | ||||| || ||||| ||| Sbjct 3241 GCAGATTAAGATCATGATGGATCTCATATCAAGGGACTTATCATAAACTTTATACATAAC 3182 Query 635747 TTTTGGCCATC 635757 || |||||||| Sbjct 3181 TTCTGGCCATC 3171 >seq15026 Length=5978 Score = 113 bits (124), Expect = 3e-19 Identities = 192/273 (70%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 671533 TGTTGAAGGAAAAAGAATTCAAATCAGATTCAATGGTAGAACACTTCCAATGTTCCCTAA 671592 ||||||||| |||||| ||||| | | || || |||||| | || ||||| || Sbjct 3513 TGTTGAAGGTAAAAGAGTTCAATTTGGCTTTAAATCTAGAACTTTACCTCACTTCCCAAA 3454 Query 671593 ATTCGATGACAGTGCATTTTCCAGAGGTTTTTGTCGA-AATTCTTTTATTGAGGGTCTTG 671651 ||| | || || ||| | ||||||| ||| ||| || ||| || | || Sbjct 3453 GCATGATTATGGTCCAGCTTCTAAAGGTTTT-GTCATTAATAATTATATC-AGTGGGTTA 3396 Query 671652 GA-CCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCT 671710 || ||| ||||| |||||||| | |||| ||| ||||||||| ||||| |||| || Sbjct 3395 GATCCTCCAGAATTCTTCTTCCATGCTATGGGAGGACGTGAAGGTCTTATTGATACAGCA 3336 Query 671711 ATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATC 671770 | |||||| | || || || ||||||||||||| ||| || ||| || ||||||||| Sbjct 3335 GTCAAAACTTCGGAAACAGGATATATTCAAAGAAGACTCGTAAAAGCACTGGAAGATATC 3276 Query 671771 AAACAAGAATATGATGGTACAGTAAGAAATGCA 671803 | | ||||||| ||||| || || ||| || Sbjct 3275 ATGGTAAAATATGACGGTACTGTGAGGAATTCA 3243 >seq5415 Length=2397 Score = 102 bits (112), Expect = 6e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||||||||| | || | || ||||||||||| || || || |||||| ||| | | Sbjct 872 TTATCAAGACCGAAGGCGAGTGCGGCAGCAGTTGGCTCGTTGATGATTCTCTTAACTTCA 813 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 ||| || ||| | || ||||| || || |||||||| || || || || ||||| || Sbjct 812 AGATTTGCGATTTTACCAGCATCCTTGGTAGCTTGTCTCTGAGAGTCATTGAAATAAGCT 753 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 |||||||||| ||| || || | | | |||||| | |||||| Sbjct 752 GGAACAGTAACAACAGCCTCCTTGATTGATTTACCTAGATAAGC 709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779712674276278