Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3902 176 4e-38 seq14470 150 1e-30 seq16114 122 7e-22 seq21020 120 2e-21 seq17691 118 9e-21 seq22269 114 1e-19 seq18786 114 1e-19 seq5463 114 1e-19 seq5817 109 4e-18 seq13051 93.3 3e-13 seq22013 87.8 1e-11 >seq3902 Length=5347 Score = 176 bits (194), Expect = 4e-38 Identities = 361/530 (68%), Gaps = 9/530 (2%) Strand=Plus/Plus Query 368584 GATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGAT 368643 ||||||||| | ||||||| ||| | |||||| | ||||| || | ||| ||||| Sbjct 3112 GATTGGTGTTTCTCAAGAAATAGATATTGGGGTAACCCAATCCCTATCTGGGTTTCTGAA 3171 Query 368644 GATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGG-TGT 368702 || ||||||||||| ||| | ||||||||||||||| | ||||| |||| || ||| Sbjct 3172 GACATGGAAGAAATTGTATGTGTTGGTTCAATTAAAGAACTTTAAGAACTATCAGGTTGT 3231 Query 368703 GCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAA 368762 | | || || | |||| | |||| || | |||||||| |||| |||||||||||| | Sbjct 3232 GGAGAA-ATCACTGATCTTCATAGAGAAAGTATTGATCATATTACCATTCCATCAAAGCA 3290 Query 368763 AGGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTC 368822 ||||||||| | | || || || ||| || ||||||||||| || |||||||| Sbjct 3291 AGGAAAAGGAGTTCTTAAGAGAATTCCAGAAGTATTCGATTGCTGGTTCGAGTCAGGTTC 3350 Query 368823 TATGCCTTATGGTCAAATACATTATCCATT--TGATAACGCAAAATACTTTGATAATGAT 368880 |||||| | | | || | ||||||||||| || | || | || || ||| Sbjct 3351 TATGCCATTCGCTTAAGTTCATTATCCATTCAGCATGTCAGAAGAAACCTT--TAA--CC 3406 Query 368881 AAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTAT 368940 | ||||| ||| | ||| | | ||| |||| |||| | |||||||| ||| Sbjct 3407 AGAGATT-CCCAGCTAACTTTATTGCTGAAGGTCTTGACTAAACCAGAGGTTGGTTCTAT 3465 Query 368941 ACCCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTA 369000 || | | || | || || ||| | | | ||| | | || || ||| | || || Sbjct 3466 ACTTTGATGGTCATCTCAACCGCTGTCATGAAGAAAGCACCATTCAAGAATTTGATCGTT 3525 Query 369001 ACTGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAAAGTAAGGGTAATTATTCC 369060 | |||||||||| || | ||||| |||| |||||||| ||| ||||| | Sbjct 3526 AATGGTATTGTTTTAGCTCCAGATGGATAAAAAATGTCAAAGTCAAAGAAAAATTACCCA 3585 Query 369061 GATCCTAATATTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATA 369110 ||||| | || | | |||| || || |||||| ||| |||||||| Sbjct 3586 GATCCAATGCTTATGGCTCATAACTTCGGAGCTGATGCTTGCAGATTATA 3635 >seq14470 Length=2603 Score = 150 bits (166), Expect = 1e-30 Identities = 260/375 (69%), Gaps = 2/375 (1%) Strand=Plus/Minus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || |||||||| |||||||| || ||||| || | ||||| |||||||| ||||| || Sbjct 1096 AACCCAGATGAAGCTGTTGCTTACGGTGCTGCCGTCCAAGCTGCTATTCTCACTGGAGAA 1037 Query 552270 ACTGATGAAAAACTACAAA-ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTT 552328 || | ||| ||| || | | ||| | |||||||| || || || ||| | Sbjct 1036 GGAGAC-AGCAACGTCAAGGATCTCCTCCTTTTGGATGTTACCCCACTCTCAACCGGTAT 978 Query 552329 AGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAA 552388 ||||| | ||||||| | |||||| ||| || ||||| ||||| || || || Sbjct 977 TGAAACTGCTGGAGGTGTCATGACTGTTCTCATTCCAAGAAACACTACCATCCCAACCAA 918 Query 552389 AAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTT 552448 || || | | || | || ||| | || || ||| | | ||| |||||| | || Sbjct 917 GAAGTCACAAATCTTCACCACCTATGCTGACAACCAACCAGGTGTCTTGATTCAAGTCTT 858 Query 552449 TGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGG 552508 ||||| |||||| | | || || ||||| | ||| |||| || || | ||||| Sbjct 857 CGAAGGTGAAAGATCAATGACCAAGGATAACCACTTACTCGGTAAATTCAACCTTGAAGG 798 Query 552509 TATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAA 552568 ||| || || ||||| | || || || ||||| ||||| ||||||||||| |||||||| Sbjct 797 TATCCCACCCGCTCCCAGAGGTGTCCCACAAATCGAAGTCACTTTCGATATTGATGCCAA 738 Query 552569 TGGAATTTTGAATGT 552583 ||||| ||||| || Sbjct 737 CGGAATCTTGAACGT 723 Score = 123 bits (136), Expect = 2e-22 Identities = 390/591 (66%), Gaps = 15/591 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || |||||| | || ||||| || ||| || ||||| |||| || | ||| Sbjct 2173 GCTATTGGAATAGATCTCGGCACCACTTACTCTTGCGTAGGTGTGTGGCTCAACGACAAA 2114 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||| || |||| |||||||| |||| || |||||||| || || ||||||| Sbjct 2113 GTTGAAATCATCCCCAACGATCAAGGAAACAACACCACTCCATCATACGTCGCTTTCACT 2054 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| || | | ||| |||| || |||| || |||||| || | || || | || Sbjct 2053 GAAGAAGAGAGACTTA-TTGGAGACTCAGCCAAGAATCAAGTTGCTAGAAACCCCAAGAA 1995 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | || || || || | | || ||||||| || ||| | |||| | Sbjct 1994 CACCGTCTTCGACGCCAAGAGACTTATCGGAAGAAAATTCTCTGAGAAGCAAATTCAAGA 1935 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATG---TTTCTGGAAAACCTTATATTGA 550287 || |||||||||||||| ||| | | | | | ||| || || |||| Sbjct 1934 CGACATGAAGCATTGGCCATTCAAGGTCGAGCAAGGACCAGCTGACAAGCCAGTCATTGT 1875 Query 550288 AG-CTACTCATGAAGGATCTGTTAAACAATTTTCAC-CAGAACAAATTTCATCTATGGTT 550345 | | ||| |||| | || || || ||| | ||| |||| ||||||||||| Sbjct 1874 TGTCGACT--ACAAGGGTGAAGCCAAGAAGTTCCACGCTGAAGAAATCTCATCTATGGTC 1817 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTC-AAGA-AGTTACGGATGCAG 550403 || || || ||||| ||| || |||| | || || |||| || | | | || | Sbjct 1816 TTGATCAAGATGAAGGAAATCGCTGAAGCTTATCTT--TCAAAGACTGTCAAGAACGCTG 1759 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || ||||| ||||| ||||| || |||||||| | ||||| || || |||||||| Sbjct 1758 TTATCACTGTCCCAGCTTATTTCAACGACTCACAGAGACAAGCCACCAAGGATGCTGGTA 1699 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 || | || | || ||||| | || ||||| || || |||||||| || |||| | Sbjct 1698 CCATCTCAGGTATGAACGTTCTCAGAATCATCAACGAGCCAACTGCTGCCGCTATTGCTT 1639 Query 550524 ATGGACTTGATAA-ACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 | || | || || | || || ||||| || || |||||||| ||| Sbjct 1638 ACGGTTTGGACAAGAAATCAT-CCCAAGAGAAAAACGTTCTCATCTTCGAT 1589 >seq16114 Length=4999 Score = 122 bits (134), Expect = 7e-22 Identities = 408/615 (66%), Gaps = 29/615 (5%) Strand=Plus/Plus Query 428093 GTTGAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGT 428152 ||||| |||| |||||||| ||||||| |||||| | ||| | | ||| | ||||| Sbjct 2298 GTTGACCAACCTGTTCCAATACCTTCTGCACCATTAATAAGCACTAATGGTAAAACTGGA 2357 Query 428153 GCATAATATTGTGGTTCAAT---CATT--TTATT-ATCTTCATATTGTAAATGTAAAATA 428206 ||||| ||| || ||||| |||| || || | || ||| | ||| || | Sbjct 2358 ACATAAAATTCAGGCTCAATTCCCATTCCTTCTTCAATTTAATACTTTAACAGTGGA--- 2414 Query 428207 TCAAAATCATGCTCGATAAATAtttttttAGCCAATTCA--TCAAGTTGTGTAAAGATAT 428264 ||| || | ||| |||||| | | || || | | || ||||||| ||||| Sbjct 2415 TCA---TCGTTCTCATTAAATAGGGATCTTGCAAAGGGAGTTAAATTTGTGTA--GATAT 2469 Query 428265 ATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCA 428324 |||| | |||||||| ||||| ||||| ||||||||| ||||||| ||| |||| Sbjct 2470 ATCTCGGACTTGCGGACTCTTTCCCTCCCATCATTCTAGTACCAAATTAACCAATAGGTT 2529 Query 428325 TCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGT-ACTA 428383 ||||||||| | ||| |||||||| ||| ||| || |||||||| | || || | | Sbjct 2530 GCAATAAATTGAGATTGTTACTTCCAACAAAATCTTATGCCATATTTATTATAGTCATTT 2589 Query 428384 GTTAAGGATTGT-TCACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTC 428442 | || || | |||||||||||||| || | || || ||| |||| Sbjct 2590 GCAAAC--TTATCTCACCATGATGATAAGCTGTGTGCTCTGCAATATATCCTGACAATTA 2647 Query 428443 TGATACCTTTATTTCTTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCG 428502 | ||| || ||||| |||| ||| | | |||| | | | | | || | ||| | Sbjct 2648 GGCTACTTTGATTTCAGCTTT-TAATTTTC-TCTTAAAACAAGCGA-ATAAGATTTTCCT 2704 Query 428503 TTGTGATGGTTTGAATCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTGA 428562 || || |||| |||||||| | | |||||||| || | ||||||| | | ||| Sbjct 2705 TTAACCAGGCTTGAGACCATCCATCACAGATGGTATAGACCTCATATTATCAGCTATTGA 2764 Query 428563 G-AATGATATTAGTTCTTGATGAATGAAATCATAATATGATA-CTCGTTTTTG-TGCATT 428619 | ||||| || |||||||||| | || || ||| | | | ||| ||| || | Sbjct 2765 GAAATGA-ATGAGTTCTTGATCGACAAACTCTGCATAGCACAGTTTGTTCTTGCTG--TG 2821 Query 428620 ATCAATGTAATTGTTGGGATTATAAGTATTTACCCATATTTTTCGATCATTTTCTCtttt 428679 ||| | |||| | ||||||||| | | | | ||| | |||| ||||| | || | | Sbjct 2822 ATCGACGTAAATATTGGGATTAAACTAACTAAGCCAGTTCTTTCTATCATCTGCTTTAGT 2881 Query 428680 tttATCAAAAGCTAA 428694 || ||||||||| Sbjct 2882 CTTGCTAAAAGCTAA 2896 >seq21020 Length=1175 Score = 120 bits (132), Expect = 2e-21 Identities = 155/210 (74%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||||||| |||||| ||||||||| || | || |||||| |||||||| Sbjct 653 CAAG-TGAAGGGTAGATTCTTTTTGAATATTGTAGTCTGAAAGGGTTCTTCCATCTTCAA 595 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||| || ||||| || |||||||| || ||||| || || || |||||||||||||| | Sbjct 594 GTTGCTTGCCGGCGAAGATAAGTCTCTGTTGATCGGGTGGGATACCTTCTTTATCTTGGA 535 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTA 563445 | ||| || || ||||| || || | || || || || || | || || Sbjct 534 TCTTTGCCTTAACGTTTTCAATAGTGTCTGATGGCTCGAC-GTCAAGGGTGATGGTCTTT 476 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || ||||| || |||||||| ||||||||| Sbjct 475 CCGGTAAGGGTCTTAACGAAGATTTGCATA 446 Score = 89.7 bits (98), Expect = 4e-12 Identities = 150/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| |||||||| ||| | ||| || ||||| || | || ||||| ||||| Sbjct 425 CAAG-TGAAGGGTTGACTCCTTCTGG--ATGTTGTAGTCGGAGAGGGTTCTGCCGTCTTC 369 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | |||||||| || ||||| ||||| || ||||| || || ||||| ||||| ||||| Sbjct 368 CAACTGTTTTCCAGCGAAAATGAGTCTCTGTTGATCGGGTGGGATTCCCTCTTTGTCTTG 309 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 || || || || ||||| ||||| | || |||| | ||||| | || | Sbjct 308 GATCTTAGCCTTGACATTTTCAATGGTATCTGATGGCTCAACAT-CAAGAGTGATGGTCT 250 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| ||||||||||||| ||| Sbjct 249 TGCCAGTGAGAGTCTTAACGAAAATTTACAT 219 >seq17691 Length=2366 Score = 118 bits (130), Expect = 9e-21 Identities = 314/477 (66%), Gaps = 2/477 (0%) Strand=Plus/Minus Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTT 552174 ||||| | || || |||||||| || || ||||| || || ||| || | | | Sbjct 1119 ATGAAGTCGTACTCGTTGGTGGTTCAACTAGAATCCCCAAGGTTCAACAATTAATCAAGG 1060 Query 552175 CTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATG 552234 || ||||| || || || ||| | || |||| |||||||| || || ||||| | Sbjct 1059 ATTTCTTCAACGGAAAGGAACCAAACAGAGGTATTAACCCAGATGAAGCCGTCGCCTACG 1000 Query 552235 GTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAA-ACTACAAAATATT 552293 | || ||| |||||| | |||| | || ||||| ||| | |||| | ||||| Sbjct 999 GAGCTGCAGTTCAAGGTGGTATTTTAGGAGGTGAAACTTCAGAAGAGACTA-AGGATATT 941 Query 552294 GTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACT 552353 | | | ||||| || || || | || ||| | || || ||||||||| | ||||| Sbjct 940 CTTTTGATCGATGTAACCCCACTTACCCTCGGTATTGAGACTGTTGGAGGTGTCATGACC 881 Query 552354 AATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTAT 552413 || | ||| | ||| ||| || || | || || |||| || | || ||| Sbjct 880 AAGATCATCAACAGAGGTACCGTCATCCCAGGAAAGAAGTCTCAAACCTTCACCACCTAT 821 Query 552414 TCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAA 552473 ||| | ||||| |||| || ||| || | || ||||| ||||||| | || || Sbjct 820 CAAGACCAACAAACAACTGTCACCATTTAAGTCTTCGAAGGTGAAAGAACCATGACCAAG 761 Query 552474 GATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTA 552533 ||||| || | |||| || || | ||||| || || || || | ||||| Sbjct 760 GATAACCATTTGTTAGGTAAATTCGATCTCACTGGTATCCCACCCGCCCCAAGAGGAGTT 701 Query 552534 CCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || ||||||||||| |||||||| ||||||| || || |||| ||| |||||| Sbjct 700 CCCCAAATTGAAGTCACTTTCGAAATCGATGAAAACTCCATATTGAGTGTCACTGCT 644 Score = 116 bits (128), Expect = 3e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 550319 TCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTT 550378 || ||||| || ||||| ||||| || | || || ||||| | | || || | | Sbjct 1768 TCCCCAGAGGAAGTTTCAGCTATGATTCTCATCAAGATGAAGGAGATTGCTGAAGCCTAT 1709 Query 550379 GTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAA 550438 | ||| ||| |||| | ||||||| || ||||| ||||||||||| ||||| |||||| Sbjct 1708 CTCGGTAGAGACGTTAAGCATGCAGTTATCACTGTCCCAGCATATTTCAATGATTCACAA 1649 Query 550439 CGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAAT 550498 | ||||| || || ||||| || || ||||| || ||||| | | || |||||| Sbjct 1648 AGACAAGCAACCAAGGATGCCGGTTTGATCGCTGGTCTCGATGTTTTGAGAATCATCAAT 1589 Query 550499 GAACCTACTGCTGCTGCACTTGCATATGG 550527 || || |||||||| || |||| ||||| Sbjct 1588 GAGCCAACTGCTGCAGCTATTGCCTATGG 1560 >seq22269 Length=1399 Score = 114 bits (126), Expect = 1e-19 Identities = 156/212 (74%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| |||||||| ||| ||||| || ||||| ||| || |||||| |||||| Sbjct 629 CAAG-TGAAGGGTTGACTCCTTTTGG--ATGTTGTAGTCACTAAGGGTTCTTCCATCTTC 573 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 |||||| ||||| |||||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct 572 AAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTATCTTG 513 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 || || || || ||||| || || | || ||| || ||||| | || | Sbjct 512 GATCTTGGCCTTGACGTTTTCAATAGTGTCTGATGGCTCAACA-TCAAGAGTGATGGTCT 454 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || || || ||||| ||||||||| Sbjct 453 TTCCAGTGAGGGTCTTCACGAAGATTTGCATA 422 Score = 111 bits (122), Expect = 1e-18 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||| | ||| || | |||||| ||| |||||| || ||||| || | |||||| Sbjct 871 CTGAGTCTGAGGACCAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGAAAGAGTT 812 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||||||||| |||||||| || || |||||||| ||||| || || || ||| Sbjct 811 CTGCCATCTTCAAGTTGCTTTCCGGCGAAGATGAGTCTTTGTTGATCGGGTGGGATACCT 752 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAG 563432 || || ||||| || ||| || || |||||| ||||| | | || | | || Sbjct 751 TCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTATCTGAAGGCTCGACGTCCAAG 692 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || || ||||| || || ||||| ||||||||| Sbjct 691 -GTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATTTGCATA 650 >seq18786 Length=1170 Score = 114 bits (126), Expect = 1e-19 Identities = 156/212 (74%), Gaps = 7/212 (3%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| |||||||| ||| ||||| || ||||| ||| || |||||| |||||| Sbjct 543 CAAG-TGAAGGGTTGACTCCTTTTGG--ATGTTGTAGTCACTAAGGGTTCTTCCATCTTC 599 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 |||||| ||||| |||||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct 600 AAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTATCTTG 659 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 || || || || ||||| || || | || ||| || ||||| | || | Sbjct 660 GATCTTGGCCTTGACGTTTTCAATAGTGTCTGATGGCTCAACA-TCAAGAGTGATGGTCT 718 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || || || ||||| ||||||||| Sbjct 719 TTCCAGTGAGGGTCTTCACGAAGATTTGCATA 750 >seq5463 Length=1496 Score = 114 bits (126), Expect = 1e-19 Identities = 156/212 (74%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| |||||||| ||| ||||| || ||||| ||| || |||||| |||||| Sbjct 620 CAAG-TGAAGGGTTGACTCCTTTTGG--ATGTTGTAGTCACTAAGGGTTCTTCCATCTTC 564 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 |||||| ||||| |||||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct 563 AAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTATCTTG 504 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 || || || || ||||| || || | || ||| || ||||| | || | Sbjct 503 GATCTTGGCCTTGACGTTTTCAATAGTGTCTGATGGCTCAACA-TCAAGAGTGATGGTCT 445 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || || || ||||| ||||||||| Sbjct 444 TTCCAGTGAGGGTCTTCACGAAGATTTGCATA 413 Score = 105 bits (116), Expect = 5e-17 Identities = 154/212 (73%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| |||||||| ||| ||||| || ||||| ||| || |||||| |||||| Sbjct 848 CAAG-TGAAGGGTTGACTCCTTTTGG--ATGTTGTAGTCACTAAGGGTTCTTCCATCTTC 792 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 |||||| ||||| |||||||| |||||||| ||||| || || || ||||| || ||||| Sbjct 791 AAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTCCTTGTCTTG 732 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 || ||| || || |||||| ||||| | | || | | || || | || | Sbjct 731 GATCTTTGCCTTGACATTCTCAATGGTATCTGAAGGCTCGACGTCCAAG-GTGATGGTCT 673 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || ||||| || || ||||| ||||||||| Sbjct 672 TTCCGGTAAGGGTCTTGACGAAGATTTGCATA 641 Score = 96.9 bits (106), Expect = 3e-14 Identities = 161/226 (71%), Gaps = 10/226 (4%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTA---CTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||||| | ||| || | |||||| ||| |||||| || || | ||| || | ||| Sbjct 1088 CTGAGTCTGAGGACCAAATGAAGAGTAGATCTTTCT--GG--ATGT-GTAGTCTGAAAGA 1034 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 ||||| |||||||||||| |||||||| || || |||||||| ||||| || || || Sbjct 1033 GTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATGAGTCTTTGTTGATCGGGTGGGATA 974 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTC 563429 ||||| || ||||| || ||| || || |||||| ||||| | | || | | Sbjct 973 CCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTATCTGAAGGCTCGACGTCC 914 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || | || || || ||||| || || ||||| ||||||||| Sbjct 913 AAG-GTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATTTGCATA 869 >seq5817 Length=6009 Score = 109 bits (120), Expect = 4e-18 Identities = 147/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGT-CATTGGCATTTCTTACGGTACC 390869 ||||||| ||||| || | ||| ||| ||| ||| | || | | ||||||| || || Sbjct 2987 ATACCATCCTCACCGTAAAGGAATTAAAT-AATCTGTTCTTTTGAAGTTCTTACAGTTCC 3045 Query 390870 ATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGT 390929 |||||||| || | | |||||||| |||| || |||||| || |||||||| Sbjct 3046 ATCATACTTCACCATCACGTCTTCTAGAGCCTTAATCAAACGTCTTTGAATGTAACCAGT 3105 Query 390930 GTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAA 390989 ||||||||||||| ||| |||| ||| | ||| || | ||| ||||| | |||||||| Sbjct 3106 TTCTGCAGTTTTAACTGCTGTATCAATGAGACCCTCACGACCTCCCATAGCATGGAAGAA 3165 Query 390990 AAATTCCATAGGATTGAGTCCA 391011 ||||| |||| | | |||| Sbjct 3166 GAATTCTTGAGGAGTTAATCCA 3187 >seq13051 Length=3562 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 723242 AAATTATTATATTAGATGAAGCAGATTCTATGACTGATGAAGCTCAAGATGCACTTCGTG 723301 |||||||||| | |||||||| |||||||||||| ||| ||||||| ||| ||| | Sbjct 2913 AAATTATTATTCTCGATGAAGCCGATTCTATGACTATTGATGCTCAAGCTGCCCTTAGAA 2854 Query 723302 TTATTATTGAACAATATAGTACAACTACGCGATTTTGTTTTATCTGTAATTATATTTCCA 723361 || ||||| |||||| ||||| ||| |||| || |||| || || || || |||| Sbjct 2853 GAATCATTGAGCAATATTCTACAAATACCAGATTCTGCATTATTTGCAACTACATCTCCA 2794 Query 723362 AAATAACCGATGCTATAAAATCAAGATGT 723390 | || | ||| || | ||||||||| Sbjct 2793 AGATCATTGATCCTCTCGCTTCAAGATGT 2765 >seq22013 Length=3844 Score = 87.8 bits (96), Expect = 1e-11 Identities = 269/407 (66%), Gaps = 12/407 (3%) Strand=Plus/Plus Query 344257 TTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAACT 344316 ||||| || ||||| || || || | || ||| | || || || | || || |||| Sbjct 485 TTATCACCAACCATATGCTTTAGTCTTTAATAGAAAGTAGGTCCTAAAAAGATCAAAACT 544 Query 344317 TCCATTCTTTGTCCC-GTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGTCC 344375 || | |||| | || || | ||| |||||||| ||||||||| || || || || Sbjct 545 TCAAA-CTTTCTACCAGTAAATCCGTTATACATGACTTCATTTCCATATCTTTGATAGCC 603 Query 344376 TAAAGCTACTAAATCA-TCATTAATTTTATTAATATTAACTCCTGTAAATGGAGTTGCAT 344434 ||| | | || | | | | |||||| || | ||| || || |||||||||| Sbjct 604 TAATTC-ATGAAGTAACTAACTAATTTCATCCACATTCTACCCACAGAAAGGAGTTGCAT 662 Query 344435 CTCCAT-ATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACCT 344493 | || | | | || |||||| | | ||||||| || || |||||||| || || || Sbjct 663 CACCTTCAGAACCATTTAAT-GAAGCTACTTTACTTAACAAGCATTCAATCAAATGCCCA 721 Query 344494 ATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTGAT 344553 || ||||| | | || ||| || |||||||| ||| ||||| |||| || ||| | Sbjct 722 ATTGTCATTCTTGAAGGGATAGCATGAGGATTAACAATCATATCTGGAACTACACCTTCT 781 Query 344554 TTTGTGAATGGAAGATCTGCACG---ATGAATTTTAAATCCAACTGTTCCTTTTTGTCCA 344610 | || ||||| ||||| | | || | | || ||| || ||||||| ||| Sbjct 782 CTAGTAAATGGTAGATCCTCTTGTCTATAAGTCATA---CCACAAGTACCTTTTTAACCA 838 Query 344611 GCTCTTGATGAGAATTTATCACCTACTGCTGGAATTCTTTCTGATCT 344657 | || | ||||||||||| | | ||||||||| ||| ||| Sbjct 839 TGACGAGAGGCAAATTTATCACCAATTTATGGAATTCTCACTGCTCT 885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028113343702870