Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07]
22,363 sequences; 67,158,112 total letters
Query= NC_021529.2
Length=247511
Score E
Sequences producing significant alignments: (Bits) Value
seq16876 84.2 3e-11
seq14905 84.2 3e-11
seq7832 84.2 3e-11
seq1705 84.2 3e-11
>seq16876
Length=6634
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 96868 TCCACAGAGATTCGAACTCTGACTGAAGGATTAAAAGTCCCATATGCTACCATTACATCA 96927
|||||||||||||||||||||||| ||||||| | |||||||| ||||||| ||||| ||
Sbjct 206 TCCACAGAGATTCGAACTCTGACTAAAGGATTTAGAGTCCCATGTGCTACCCTTACACCA 265
Query 96928 TAGA 96931
| ||
Sbjct 266 TGGA 269
>seq14905
Length=6642
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 96868 TCCACAGAGATTCGAACTCTGACTGAAGGATTAAAAGTCCCATATGCTACCATTACATCA 96927
|||||||||||||||||||||||| ||||||| | |||||||| ||||||| ||||| ||
Sbjct 206 TCCACAGAGATTCGAACTCTGACTAAAGGATTTAGAGTCCCATGTGCTACCCTTACACCA 265
Query 96928 TAGA 96931
| ||
Sbjct 266 TGGA 269
>seq7832
Length=6619
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 96868 TCCACAGAGATTCGAACTCTGACTGAAGGATTAAAAGTCCCATATGCTACCATTACATCA 96927
|||||||||||||||||||||||| ||||||| | |||||||| ||||||| ||||| ||
Sbjct 6416 TCCACAGAGATTCGAACTCTGACTAAAGGATTTAGAGTCCCATGTGCTACCCTTACACCA 6357
Query 96928 TAGA 96931
| ||
Sbjct 6356 TGGA 6353
>seq1705
Length=6603
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 96868 TCCACAGAGATTCGAACTCTGACTGAAGGATTAAAAGTCCCATATGCTACCATTACATCA 96927
|||||||||||||||||||||||| ||||||| | |||||||| ||||||| ||||| ||
Sbjct 198 TCCACAGAGATTCGAACTCTGACTAAAGGATTTAGAGTCCCATGTGCTACCCTTACACCA 257
Query 96928 TAGA 96931
| ||
Sbjct 258 TGGA 261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 791685832241080
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |