Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq22013 91.5 2e-13 >seq22013 Length=3844 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 194246 AAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGATTTAT 194304 |||| || ||||||||| || | |||| | ||||||| ||||||||||||| |||| Sbjct 866 AAATTGGTGATAAATTTGCCTCTCGTCATGGTT-AAAAAGGTACTTGTGGTATGACTTAT 808 Query 194305 TCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAATCCA 194364 |||||| ||| | |||||||| | |||| | || |||||||| ||| | ||||| Sbjct 807 AGACAAGAGGATCTACCATTTACTAGAGAAGGTGTAGTTCCAGATATGATTGTTAATCCT 748 Query 194365 AATTGTATTCCGTCCAGAATGACCATT 194391 || ||| || || |||||||| ||| Sbjct 747 CATGCTATCCCTTCAAGAATGACAATT 721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632312795438440