Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq14470 253 2e-61 seq17691 206 2e-47 seq16114 129 4e-24 seq15026 113 3e-19 seq5415 98.7 7e-15 >seq14470 Length=2603 Score = 253 bits (280), Expect = 2e-61 Identities = 943/1459 (65%), Gaps = 37/1459 (3%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || || |||||||| | ||| || |||||||| ||||| ||||| ||||| |||| ||| Sbjct 732 ATTCCGTTGGCATCAATATCGAAAGTGACTTCGATTTGTGGGACACCTCTGGGAGCGGGT 791 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| ||||| | || ||| | || || | ||||| || || | | || |||| Sbjct 792 GGGATACCTTCAAGGTTGAATTTACCGAGTAAGTGGTTATCCTTGGTCATTGATCTTTCA 851 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 || ||||| | ||| || || | | ||| || || | ||| || || || | | Sbjct 852 CCTTCGAAGACTTGAATCAAGACACCTGGTTGGTTGTCAGCATAGGTGGTGAAGATTTGT 911 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || || || || |||||||| ||| | | ||||| | ||| ||||| Sbjct 912 GACTTCTTGGTTGGGATGGTAGTGTTTCTTGGAATGAGAACAGTCATGACACCTCCAGCA 971 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATT-TTGAAGTTTTTC 281739 ||||| | ||| || || || || ||||| | |||| | || |||| ||| | Sbjct 972 GTTTCAATACCGGTTGAGAGTGGGGTAACATCCAAAAGGAGGAGATCCTTGACGTTGCTG 1031 Query 281740 ATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATC 281799 || || ||| |||||||| ||||| | |||||||| || |||||||||||||| Sbjct 1032 -TCTCCTTCTCCAGTGAGAATAGCAGCTTGGACGGCAGCACCGTAAGCAACAGCTTCATC 1090 Query 281800 AGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC 281859 || || | | | || || | || || ||||| || | || || | |||| || Sbjct 1091 TGGGTTGATTGATCTGTTAAGGGTCTTTCCGTTGAAGAAGTCGGAGAGCATTTGTTGAAC 1150 Query 281860 CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAG 281919 ||| || || | | ||| || ||||| || |||| ||| || | ||| || | || Sbjct 1151 CTTGGGGATTCTGGTTGAACCACCAACCAAGACAACTTCGTGGATTTGTCCCTTGGCGAG 1210 Query 281920 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACA 281979 ||| ||| | || ||||| |||||| | || ||| || | || ||| Sbjct 1211 GCCTGAGTCCTTAAGGACGTTTTCTACGGGTGGCATACATTTTCTGAAGAGATCCATACA 1270 Query 281980 AAGTTCTTCGAATTTAGCTCTAG---TAAGAGTGACATTATAATCAATTCCTTCGAACAA 282036 ||||| ||||| |||||||| | | ||||| || | || || || | ||| Sbjct 1271 GAGTTCCTCGAACTTAGCTCTTGAGATTTGAGTG---TTGAAGTCTTCACCCTC-AGCAA 1326 Query 282037 -AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 282095 || || |||||| | | |||| | || || || | || || || | Sbjct 1327 GAGTTTCGCATTCAATTGGGGCTTGATGGGCAGCTGAAAGAATTCTCTTTGCCTTCTCGC 1386 Query 282096 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC----TGATTGAT-TCAA-ATCTGTTTTAT 282149 || || || ||||||| | ||| | || ||||| |||| | | || || | Sbjct 1387 ATTGAGTTCTGAGTCTTCTGAGTGCTCTGGCGTTTCCGTTGATGTCAATACCAGTCTTCT 1446 Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 282209 ||||||| || |||| || | ||||| | || || ||||||||||||| Sbjct 1447 ------TCTTGAATTCAGCAACGCAATAGTCGACAAGTCTGTTGTCGAAATCTTCACCTC 1500 Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269 |||| | || | || || || | |||| ||| | || ||||||| | | | Sbjct 1501 CCAAATGGGTGTGACCGTTGGTGGCCTTAACTTCGAAGATACCTTCTTCAATGGTGAGGA 1560 Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT-TTGTCT 282328 | | ||||| || |||||||| | ||| || || || || || ||||| ||| Sbjct 1561 GGGAGACATCGAAAGTACCACCACCGAGATCGAAGATGAGAACGTT--TTTCTCTTGGGA 1618 Query 282329 TGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 || ||| || || | ||| || |||| ||| ||||||||||| || || || ||||| | Sbjct 1619 TGATTTCTTGTCCAAACCGTAAGCAATAGCGGCAGCAGTTGGCTCGTTGATGATTCTGAG 1678 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 ||| || | ||| | || | || ||||| || ||||||||||| ||||| ||||| || Sbjct 1679 AACGTTCATACCTGAGATGGTACCAGCATCCTTGGTGGCTTGTCTCTGTGAGTCGTTGAA 1738 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGT 282507 ||| || || ||||| ||||| || | | || ||| || |||||| || | Sbjct 1739 ATAAGCTGGGACAGTGATAACAGCGTTCTTGACAGTCTTTGAAAGATAAGCTTCAGCGAT 1798 Query 282508 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG-GAGAATATTGCTTGGATT 282566 || ||||| || | || | ||| ||||| |||| ||| | | | | | | ||||| || Sbjct 1799 TTCCTTCATCTTGATCAAGACCATAGATGAGATTTCTTCAGCGTGGA-ACTTCTTGGCTT 1857 Query 282567 CATTTTGATATGATACTTCAAAATATGGTTTATTACC--AACATTAAT-AACTTTAAATG 282623 || | || || ||| ||| || | | | | || | || || |||| Sbjct 1858 CACCCTTGTAGTCGACAACAATGACTGGCTTGTCAGCTGGTCCTTGCTCGACCTTGAATG 1917 Query 282624 GCCAATATTTCATATCTGATTGAACACTTTG---GTCATTAAAATCTCTACCAATTAATC 282680 |||||| ||||| || ||||| |||| ||| || | ||| || || | || Sbjct 1918 GCCAATGCTTCATGTCGTCTTGAA---TTTGCTTCTCAGAGAATTTTCTTCCGATAAGTC 1974 Query 282681 GTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTC 282740 || || || || | || || | || || ||| |||||| ||||||| |||| Sbjct 1975 TCTTGGCGTCGAAGACGGTGTTCTTGGGGTTTCTAGCAACTTGATTCTTGGCTGAGTCTC 2034 Query 282741 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 282800 |||| || ||| || || || | || ||||||||||| ||| || ||||||| Sbjct 2035 CAATAAGTCTCTCTTCTTCAGTGAAAGCGACGTATGATGGAGTGGTGTTGTTTCCTTGAT 2094 Query 282801 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 282860 | || | || ||||||||||| | || |||| |||||||| ||| |||| || | Sbjct 2095 CGTTGGGGATGATTTCAACTTTGTCGTTGAGCCACACACCTACGCAAGAGTAAGTGGTGC 2154 Query 282861 CTAAATCAATACCAATAGC 282879 | | ||| || |||||||| Sbjct 2155 CGAGATCTATTCCAATAGC 2173 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/152 (74%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 86116 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 86175 |||||||| |||| ||| || |||||||| || || || ||| | ||||| | | ||| Sbjct 1632 AAACCGTAAGCAATAGCGGCAGCAGTTGGCTCGTTGATGATTCTGAGAACGTTCATACCT 1691 Query 86176 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 86235 | || || ||| ||| || ||||||||||||| ||| || ||||| ||||| ||| Sbjct 1692 GAGATGGTACCAGCATCCTTGGTGGCTTGTCTCTGTGAGTCGTTGAAATAAGCTGGGACA 1751 Query 86236 GTAATAACTGCTTTATTAATAGGTTTTTGTAA 86267 || ||||| || || || | | || |||| || Sbjct 1752 GTGATAACAGCGTTCTTGACA-GTCTTTGAAA 1782 >seq17691 Length=2366 Score = 206 bits (228), Expect = 2e-47 Identities = 720/1110 (65%), Gaps = 19/1110 (2%) Strand=Plus/Plus Query 281451 CATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTT 281510 |||| | || || |||||||||||||| || || ||||| | || |||||||| || Sbjct 670 CATCGATTTCGAAAGTGACTTCAATTTGGGGAACTCCTCTTGGGGCGGGTGGGATACCAG 729 Query 281511 CCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAA 281570 | || ||| | || | || ||||| || || | ||| |||||| ||||| | Sbjct 730 TGAGATCGAATTTACCTAACAAATGGTTATCCTTGGTCATGGTTCTTTCACCTTCGAAGA 789 Query 281571 TTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTAC 281630 || || || || ||||| | ||| ||| || || || | || || || | Sbjct 790 CTTAAATGGTGACAGTTGTTTGTTGGTCTTGATAGGTGGTGAAGGTTTGAGACTTCTTTC 849 Query 281631 AAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAAC 281690 || || || ||| | || || |||||||| | ||| ||| | || || | || Sbjct 850 CTGGGATGACGGTACCTCTGTTGATGATCTTGGTCATGACACCTCCAACAGTCTCAATAC 909 Query 281691 CAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGAC 281750 | || | ||| || || ||||| | | | ||||| | | | ||| ||||| || Sbjct 910 CGAGGGTAAGTGGGGTTACATCGATCAAAAGAATATCCTTAGTCTCTTCTGAAGTTTCAC 969 Query 281751 CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAG 281810 | | | |||| | |||||| ||||| || || || || |||||||| || |||| | Sbjct 970 CTCCTAAAATACCACCTTGAACTGCAGCTCCGTAGGCGACGGCTTCATCTGGGTTAATAC 1029 Query 281811 TTTCATTTAGTTTTTTACCATTGAAAAAAT--TTGAAAGAAGTTGTCTTACCTTAGGAAT 281868 | ||| ||| || || ||||| |||| |||| | |||| ||||| || || Sbjct 1030 CTCTGTTTGGTTCCTTTCCGTTGAAGAAATCCTTGATTAA--TTGTTGAACCTTGGGGAT 1087 Query 281869 ACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATC 281928 | || ||| || ||||| | ||| | ||||| | | | ||| | || || ||| Sbjct 1088 TCTAGTTGAACCACCAACGAGTACGACTTCATCAATATCGGTTTTCTTCATACCTGCATC 1147 Query 281929 CAATAAAACTTTTTCAACGGGTTCAAGAC-CAGCTCTAAACAAGTCTGAACAAAGTTCTT 281987 | |||| || ||| |||| |||| | || | ||||| || || | ||||| Sbjct 1148 GTCGAGGACTTATTGAACTGGTTAAAGAGTCTTCT-TGAACAAATCATTGCATAATTCTT 1206 Query 281988 CGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTT 282047 ||||| ||||||| |||| || | | |||||| || || | | |||| | Sbjct 1207 CGAATCTAGCTCTGGTAATGGTCTCGCTGAGATCAATACCGTCCATAAGGTTCTCAATTG 1266 Query 282048 CAATCGTAGTTTGAGTCGA-AGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTT 282106 || | | |||||| | || | || || | | || || |||| | | | ||| Sbjct 1267 AAACCTTGGTTTGA-TGGACACTTGAAAGATCTCTCTTGGCCTTTTCAACTTCAGCTCTT 1325 Query 282107 AGTCTTCGT-AAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAA-T 282164 | |||| |||||| ||| | || | |||| | || | || |||||||| | Sbjct 1326 AA-CTTCTAGAAGGCTCTTGGGTCGTCCTTGATATCTTTATTGTTCTTCTTCTTGAAAAT 1384 Query 282165 CTTCAACACACCATGTTAC--AAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATT 282222 ||| | | |||| ||| | | ||| ||||||||||||||||| | |||| Sbjct 1385 CTTAATGAAG---TGTTCAGTAAGTCTTTGATCGAAATCTTCACCTCCCAAATGGGTATC 1441 Query 282223 TCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATG 282282 || ||||| || | ||||| ||||| |||| || | ||| | ||||| Sbjct 1442 ACCGCTAGTAGCGACGACCTCGAAAACTCCATTATCAATAGTAAGAAGGGAGACATCGAA 1501 Query 282283 GGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAG 282342 || || ||||| | ||| || | | | ||| | ||| |||| || || || | Sbjct 1502 AGTACCTCCACCAAGATCGAAGACGATAATGTTCTTCTCTC---CTTGCTTCTTGTCCAT 1558 Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 |||||| |||| ||| ||||||||||| ||||| || ||||||||||||| |||||||| Sbjct 1559 ACCATAGGCAATAGCTGCAGCAGTTGGCTCATTGATGATTCTCAAAACATCGAGACCAGC 1618 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 || || ||||| || || ||||||||||||||||| || |||||||| || ||||| Sbjct 1619 GATCAAACCGGCATCCTTGGTTGCTTGTCTTTGTGAATCATTGAAATATGCTGGGACAGT 1678 Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522 ||||| |||| | || ||| | || | ||| || || | | ||||| || | Sbjct 1679 GATAACTGCATGCTTAACGTCTCTACCGAGATAGGCTTCAGCAATCTCCTTCATCTTGAT 1738 Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAGA 282552 | |||||| | ||||| || ||||| || Sbjct 1739 GAGAATCATAGCTGAAACTTCCTCTGGGGA 1768 Score = 98.7 bits (108), Expect = 7e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 86177 ||| || |||| |||||| |||||||| ||||| || ||| | | |||||| | ||| || Sbjct 1559 ACCATAGGCAATAGCTGCAGCAGTTGGCTCATTGATGATTCTCAAAACATCGAGACCAGC 1618 Query 86178 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 86237 || | | | ||| ||||||||||| |||| ||||| ||||||||||| ||||| Sbjct 1619 GATCAAACCGGCATCCTTGGTTGCTTGTCTTTGTGAATCATTGAAATATGCTGGGACAGT 1678 Query 86238 AATAACTGCTTTATTAA 86254 |||||||| | |||| Sbjct 1679 GATAACTGCATGCTTAA 1695 >seq16114 Length=4999 Score = 129 bits (142), Expect = 4e-24 Identities = 215/311 (69%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 400303 CTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATT 400362 || ||||| || || |||||||| || ||| | | || ||| ||| || | ||| || Sbjct 3481 CTTATTTTAACTGAAGGAGATTCTGCAAAATCTCTAGCAATGAGTGGTCTGTAAGTTGTT 3422 Query 400363 GGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCT 400422 || |||||| || ||||||||||||||| ||||||||| | || ||||| || ||| Sbjct 3421 GGCAGAGATCGTTTTGGAGTTTTCCCACTAAGAGGAAAATTATTAAATGTAAGAGATTGC 3362 Query 400423 AGTCCTaaaaaaaTTGCCGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTT 400482 || || ||||| ||||| ||||| || | || | || || | || || Sbjct 3361 GGTATGAAGTAAATTTTAGATAACGAGGAGATCCAAAATATTATCAAGATACTCGGGCTA 3302 Query 400483 GAACAAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTT 400542 | || | | ||||||||||| || || |||||||| ||| |||||| | Sbjct 3301 TATATGGGTAGATAATATGATGATCTTAAGACATTGCGATATGGATCTATAATGATTATG 3242 Query 400543 GCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTTTATCCATTGT 400602 || ||| ||||| |||||| | |||||||| ||| | ||||| || ||||| ||| Sbjct 3241 GCAGATTAAGATCATGATGGATCTCATATCAAGGGACTTATCATAAACTTTATACATAAC 3182 Query 400603 TTTTGGCCATC 400613 || |||||||| Sbjct 3181 TTCTGGCCATC 3171 >seq15026 Length=5978 Score = 113 bits (124), Expect = 3e-19 Identities = 192/273 (70%), Gaps = 4/273 (1%) Strand=Plus/Minus Query 435006 TGTAGAAGGAAAAAGAATTCAAATCAGATTCAATGGTAGAACACTTCCAATGTTCCCTAA 435065 ||| ||||| |||||| ||||| | | || || |||||| | || ||||| || Sbjct 3513 TGTTGAAGGTAAAAGAGTTCAATTTGGCTTTAAATCTAGAACTTTACCTCACTTCCCAAA 3454 Query 435066 ATTTGATGATAGTGCATTCTCCAGAGGTTTTTGTCGTAATTCCTT-TATCGAGGGTCTTG 435124 |||| || || || || | ||||||| ||| | | | || |||| || | || Sbjct 3453 GCATGATTATGGTCCAGCTTCTAAAGGTTTT-GTCATTAATAATTATATC-AGTGGGTTA 3396 Query 435125 GA-CCTTTTGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCT 435183 || ||| ||||| |||||||| | |||| || ||||||||| ||||| ||||||| Sbjct 3395 GATCCTCCAGAATTCTTCTTCCATGCTATGGGAGGACGTGAAGGTCTTATTGATACAGCA 3336 Query 435184 ATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATT 435243 | |||||| | || || || ||||||||||||| ||| || || || |||||||| Sbjct 3335 GTCAAAACTTCGGAAACAGGATATATTCAAAGAAGACTCGTAAAAGCACTGGAAGATATC 3276 Query 435244 AAACAAGAATATGATGGTACAGTGAGAAATGCA 435276 | | ||||||| ||||| ||||| ||| || Sbjct 3275 ATGGTAAAATATGACGGTACTGTGAGGAATTCA 3243 >seq5415 Length=2397 Score = 98.7 bits (108), Expect = 7e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 ||||||||||| | || | || ||||||||||| || || || |||||| ||| | | Sbjct 872 TTATCAAGACCGAAGGCGAGTGCGGCAGCAGTTGGCTCGTTGATGATTCTCTTAACTTCA 813 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 ||| || ||| | || ||||| || || |||||||| || || || || ||||| || Sbjct 812 AGATTTGCGATTTTACCAGCATCCTTGGTAGCTTGTCTCTGAGAGTCATTGAAATAAGCT 753 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGC 282498 |||||||||| ||| || || | | | ||| || | |||||| Sbjct 752 GGAACAGTAACAACAGCCTCCTTGATTGATTTACCTAGATAAGC 709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739532471206038