Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000295675.1_202012-09-07] 22,363 sequences; 67,158,112 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq22013 93.3 6e-14 >seq22013 Length=3844 Score = 93.3 bits (102), Expect = 6e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 63721 AAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA 63780 ||| ||||| | ||| | | ||| ||| |||| |||||||||||||| ||| | Sbjct 897 AAAGTAAAAATGAGAGCAGTGAGAATTCCATAAATTGGTGATAAATTTGCCTCTCGTCAT 838 Query 63781 GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGAC 63840 | | |||||||||| |||||||||| |||| ||||||| ||| | || ||||| | ||| Sbjct 837 GGTTAAAAAGGTACTTGTGGTATGACTTATAGACAAGAGGATCTACCATTTACTAGAGAA 778 Query 63841 GGTATCGTACCCGATCTCGTCATCAATCCACACGCT 63876 ||| | || || ||| | | | ||||| || ||| Sbjct 777 GGTGTAGTTCCAGATATGATTGTTAATCCTCATGCT 742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666888727466280