Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq22450 89.7 5e-14 >seq22450 Length=6857 Score = 89.7 bits (98), Expect = 5e-14 Identities = 102/136 (75%), Gaps = 6/136 (4%) Strand=Plus/Plus Query 14506 AGGAAATAAATATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTG 14565 ||||||| | | ||||||| || | ||||||||||| || | |||||| |||| Sbjct 5584 AGGAAAT---TGTAATGGCAACAGGTATTGTAAAATGGTTCAATGATTCTAAAGGTTTTG 5640 Query 14566 GCTTTATCACTTCAGAAGAAGGCA---AAGATTTGTTCGCTCACTTCTCAGCAATCCAAT 14622 |||| || ||| | || |||||| ||||||||||||| || |||||||||||| || Sbjct 5641 GCTTCATTACTCCTGACGAAGGCGGCGAAGATTTGTTCGCACATTTCTCAGCAATCGTAT 5700 Query 14623 CTGATGGATTCAAATC 14638 || | || ||||| || Sbjct 5701 CTCAAGGCTTCAAGTC 5716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48439990267120