Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq17288 104 3e-17 >seq17288 Length=143976 Score = 104 bits (114), Expect = 3e-17 Identities = 148/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||| ||||| | || ||||| ||||| |||||| || ||| Sbjct 116978 GCAAAGTCAGTGTGCATACCTTCGTCTCTTGAAATGAGCTCATTTGAGAAGGTGAGACCT 116919 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||| | |||||| || | || || || || ||||||||||| Sbjct 116918 GGCATGAGGCCACGCTTCTTAAGCCAGAAGATTGAGCAGAAGGATCCTGAGAAGAAGATG 116859 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG-GAGCGCGACTTTGTGTCAAA 126225 ||||| | | ||||| |||| || | |||||| ||| ||||| | ||| Sbjct 116858 CCCTCGATAGCAGCGAAAGCAATTAGTCTCTCAGCGAAGCTAGCGC----TCTCACCAAT 116803 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTT 126252 |||||| || ||||| | ||||| || Sbjct 116802 CCACTTAATGGCCCATTCAGCCTTCTT 116776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597161550817600