Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq17194 87.8 2e-12 >seq17194 Length=120762 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||||||||||| ||| | ||| || ||||||||||||| Sbjct 43858 GACTCCTTTTGGATGTTGTAGTCGCTCAAAGTTCTGCCGTCTTCAAGTTGTTTACCGGCG 43917 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||| || | ||||| || || || |||||||| ||||| Sbjct 43918 AAGATGAGTCTTTGTTGATCGGGTGGAATACCTTCCTTGTC 43958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496102851638400