Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq18779 134 5e-26 seq10467 114 5e-20 seq6376 114 5e-20 seq5238 114 5e-20 seq1293 114 5e-20 seq20086 113 2e-19 seq2143 113 2e-19 seq19259 109 2e-18 seq2762 107 8e-18 seq490 102 3e-16 seq3525 100 1e-15 seq259 100 1e-15 seq1609 93.3 2e-13 seq17194 91.5 6e-13 >seq18779 Length=42783 Score = 134 bits (148), Expect = 5e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || ||||| || || || |||||||||||||| |||| Sbjct 12684 ATGCAAATCTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTTGATGTTGAGCCATCA 12743 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || || |||||||||||||| ||||| || |||||| Sbjct 12744 GACACTATTGAAAACGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCCCCCGATCAA 12803 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | ||||| | || || |||||||||||||||||||| | || || || Sbjct 12804 CAAAGACTCATTTTTGCTGGAAAGCAACTTGAAGATGGAAGAACCCTTAGTGACTACAAC 12863 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| |||| |||||||| || | ||| ||||||| Sbjct 12864 ATCCAAAAGGAGTCAACCCTTCACTTGGTCCTCAGATTGAGAGG 12907 Score = 113 bits (124), Expect = 2e-19 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || || || || ||| | || ||||| | ||| Sbjct 12456 ATGCAAATCTTCGTTAAGACCCTCACAGGCAAGACCATCACTTTGGACGTTGAGCCCTCT 12515 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| ||| | | || || || ||||| ||||||||||| || || |||||| Sbjct 12516 GACACCATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCCGATCAA 12575 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || ||| | || || ||||| ||||| |||||||| | || || || Sbjct 12576 CAAAGACTCATCTTCGCTGGCAAGCAACTCGAAGACGGAAGAACCCTTAGTGACTACAAC 12635 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| |||| |||||||| || | ||||| |||||| Sbjct 12636 ATCCAGAAGGAATCAACCCTTCACTTGGTTCTCAGACTCAGAGGA 12680 Score = 107 bits (118), Expect = 8e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || || | || || || | || Sbjct 12912 ATGCAAATCTTCGTCAAGACCCTTACCGGAAAGACCATCACCTTGGACGTCGAGCCTTCA 12971 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | || ||| || ||||| |||||||| || || || |||||| Sbjct 12972 GATACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGTATCCCACCCGATCAA 13031 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | ||||| | || || |||||||||||||||||||| | || || || Sbjct 13032 CAAAGACTCATTTTTGCTGGAAAGCAACTTGAAGATGGAAGAACCCTTAGTGACTACAAC 13091 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| |||| |||||||| || | ||| ||||||| Sbjct 13092 ATCCAAAAGGAGTCAACCCTTCACTTGGTCCTCAGATTGAGAGG 13135 Score = 107 bits (118), Expect = 8e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || || || |||||||| |||| Sbjct 13140 ATGCAAATCTTCGTCAAGACCCTTACCGGAAAGACCATCACCCTCGATGTTGAGCCATCA 13199 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | || || || | || |||||||| || || || |||||| Sbjct 13200 GACACCATTGAAAACGTGAAGGCCAAGATCTAGGACAAGGAAGGTATCCCACCCGATCAA 13259 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || ||| | || || ||||||||||| || ||||| ||| | || || || Sbjct 13260 CAAAGACTTATCTTCGCTGGTAAGCAACTTGAAGACGGCAGAACCTTGTCCGACTACAAC 13319 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| |||| || ||||| || | ||||| ||||| Sbjct 13320 ATCCAAAAGGAGTCAACTCTCCACTTGGTCCTCAGACTTAGAGG 13363 >seq10467 Length=17661 Score = 114 bits (126), Expect = 5e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||| ||||| ||||||||||||||||| || | || Sbjct 3610 AATGTAGATCTTCGTCAAGACTTTGACCGGTAAGACTATTACTCTTGATGTAGAGCCTTC 3669 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| ||| |||| || |||||||| || ||||| ||||| |||||||| Sbjct 3670 TGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCTGATCA 3729 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || || | || || | | ||||| || ||||| ||| | ||||| || Sbjct 3730 ACAGAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGCAGAACCTTGTCTGATTACAA 3789 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | || || |||| || ||||| || || Sbjct 3790 CATCCAAAAAGAATCAACTCTCCACTTGGTCTT 3822 Score = 114 bits (126), Expect = 5e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||| ||||| ||||||||||||||||| || | || Sbjct 14044 AATGTAGATCTTCGTCAAGACTTTGACCGGTAAGACTATTACTCTTGATGTAGAGCCTTC 13985 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| ||| |||| || |||||||| || ||||| ||||| |||||||| Sbjct 13984 TGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCTGATCA 13925 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || || | || || | | ||||| || ||||| ||| | ||||| || Sbjct 13924 ACAGAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGCAGAACCTTGTCTGATTACAA 13865 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | || || |||| || ||||| || || Sbjct 13864 CATCCAAAAAGAATCAACTCTCCACTTGGTCTT 13832 >seq6376 Length=13110 Score = 114 bits (126), Expect = 5e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||| ||||| ||||||||||||||||| || | || Sbjct 12008 AATGTAGATCTTCGTCAAGACTTTGACCGGTAAGACTATTACTCTTGATGTAGAGCCTTC 12067 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| ||| |||| || |||||||| || ||||| ||||| |||||||| Sbjct 12068 TGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCTGATCA 12127 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || || | || || | | ||||| || ||||| ||| | ||||| || Sbjct 12128 ACAGAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGCAGAACCTTGTCTGATTACAA 12187 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | || || |||| || ||||| || || Sbjct 12188 CATCCAAAAAGAATCAACTCTCCACTTGGTCTT 12220 >seq5238 Length=45295 Score = 114 bits (126), Expect = 5e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||| ||||| ||||||||||||||||| || | || Sbjct 21819 AATGTAGATCTTCGTCAAGACTTTGACCGGTAAGACTATTACTCTTGATGTAGAGCCTTC 21878 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| ||| |||| || |||||||| || ||||| ||||| |||||||| Sbjct 21879 TGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCTGATCA 21938 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || || | || || | | ||||| || ||||| ||| | ||||| || Sbjct 21939 ACAGAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGCAGAACCTTGTCTGATTACAA 21998 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | || || |||| || ||||| || || Sbjct 21999 CATCCAAAAAGAATCAACTCTCCACTTGGTCTT 22031 >seq1293 Length=7053 Score = 114 bits (126), Expect = 5e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||| ||||| ||||||||||||||||| || | || Sbjct 6297 AATGTAGATCTTCGTCAAGACTTTGACCGGTAAGACTATTACTCTTGATGTAGAGCCTTC 6356 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| ||| |||| || |||||||| || ||||| ||||| |||||||| Sbjct 6357 TGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCTGATCA 6416 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || || | || || | | ||||| || ||||| ||| | ||||| || Sbjct 6417 ACAGAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGCAGAACCTTGTCTGATTACAA 6476 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | || || |||| || ||||| || || Sbjct 6477 CATCCAAAAAGAATCAACTCTCCACTTGGTCTT 6509 >seq20086 Length=32257 Score = 113 bits (124), Expect = 2e-19 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||| ||||| ||||||||||||||||| || | || Sbjct 21971 AATGTAGATCTTCGTCAAGACTTTGACCGGTAAGACTATTACTCTTGATGTAGAGCCTTC 22030 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| ||| |||| || |||||||| || ||||| ||||| |||||||| Sbjct 22031 TGATACCATCGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCTGATCA 22090 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || || | || || | | ||||| || ||||| ||| | ||||| || Sbjct 22091 ACAGAGACTCATCTTTGCTGGAAAGTAGTTGGAAGACGGCAGAACCTTGTCTGATTACAA 22150 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || |||| || ||||| || Sbjct 22151 CATCCAAAAAGAATCAACTCTCCACTTGGT 22180 >seq2143 Length=26640 Score = 113 bits (124), Expect = 2e-19 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || || || || ||| | || ||||| | ||| Sbjct 6725 ATGCAAATCTTCGTTAAGACCCTCACAGGCAAGACCATCACTTTGGACGTTGAGCCCTCT 6666 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| ||| | | || || || ||||| ||||||||||| || || |||||| Sbjct 6665 GACACCATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCACCCGATCAA 6606 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || ||| | || || ||||| ||||| |||||||| | || || || Sbjct 6605 CAAAGACTCATCTTCGCTGGCAAGCAACTCGAAGACGGAAGAACCCTTAGTGACTACAAC 6546 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| |||| |||||||| || | ||||| |||||| Sbjct 6545 ATCCAGAAGGAATCAACCCTTCACTTGGTTCTCAGACTCAGAGGA 6501 Score = 104 bits (114), Expect = 9e-17 Identities = 158/224 (71%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || || || |||||||| |||| Sbjct 6010 ATGCAAATCTTCGTCAAGACCCTTACCGGAAAGACCATCAC-CTCGATGTTGAGCCATCA 5952 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | || || || | || |||||||| || || || |||||| Sbjct 5951 GACACCATTGAAAACGTGAAGGCCAAGATCTAGGACAAGGAAGGTATCCCACCCGATCAA 5892 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || ||| | || || ||||||||||| || ||||| ||| | || || || Sbjct 5891 CAAAGACTTATCTTCGCTGGTAAGCAACTTGAAGACGGCAGAACCTTGTCCGACTACAAC 5832 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| |||| || ||||| || | ||||| ||||| Sbjct 5831 ATCCAAAAGGAGTCAACTCTCCACTTGGTCCTCAGACTTAGAGG 5788 Score = 100 bits (110), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 || || |||||||||||||| ||||| || ||||||||| | | ||||| | || || Sbjct 6154 AAGATCCAAGATAAGGAAGGTATTCCCCCCGATCAACAAAGACTCATTTTTGCTGGAAAG 6095 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 |||||||||||||||||||| | || || || || | ||||| |||| |||||| Sbjct 6094 CAACTTGAAGATGGAAGAACCCTTAGTGACTACAACATCCAAAAGGAGTCAACCCTTCAC 6035 Query 391254 TTAGTATTAAGACTGAGAGG 391273 || || | ||| ||||||| Sbjct 6034 TTGGTCCTCAGATTGAGAGG 6015 >seq19259 Length=46844 Score = 109 bits (120), Expect = 2e-18 Identities = 242/361 (67%), Gaps = 3/361 (1%) Strand=Plus/Plus Query 451245 CTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTG 451304 |||||||||| ||||||||||| | | || ||||| |||| || ||| ||| || Sbjct 31532 CTGAAGAAATCTCATCTATGGTCTTGATCAAGATGAAGGAAATCGCTGAAGCTTATCTTT 31591 Query 451305 GTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGC 451364 | || | | || || || ||||| || ||||||||||| || |||| | | Sbjct 31592 CAAAGACTGTCAAGAACGCTGTTATCACTGTCCCAGCTTATTTCAACGACTCACAGAGAC 31651 Query 451365 AAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAAC 451424 |||| || || ||||| || || | ||| | || ||||| |||| || || || | Sbjct 31652 AAGCCACCAAGGATGCTGGTACCATCTCAGGTATGAACGTTCTCAGAATCATCAACGAGC 31711 Query 451425 CTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTA 451484 | || || || ||| | || || || | ||| || ||| | | |||| ||||| Sbjct 31712 CAACTGCTGCCGCTATTGCTTACGGTTT-GGACAAG--AAATCATCCCAAGAGAAAAACG 31768 Query 451485 TTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATG 451544 || | | || ||| | ||||| || ||| ||| || | || | |||||||| | Sbjct 31769 TTCTCATCTTCGATCTCGGTGGTGGTACTTTCGATGTCTCCCTCCTCACCATTGAAGAAG 31828 Query 451545 GGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 | | || ||||| ||||| ||||| ||| | || ||| | |||||||||||| | || | Sbjct 31829 GTATCTTCGAAGTTAAGGCCACCAACGGTCACACCCATTTGGGAGGTGAAGATTTCGACA 31888 Query 451605 A 451605 | Sbjct 31889 A 31889 >seq2762 Length=67969 Score = 107 bits (118), Expect = 8e-18 Identities = 298/453 (66%), Gaps = 23/453 (5%) Strand=Plus/Minus Query 451154 GAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTA 451213 || || |||||||| | || || | ||||| | || || || || ||| |||| Sbjct 58198 GACAAGAAATTCTTGCCCTACGAAATCGTAAACAAGGGTGGCAAACCATACATTAAAGTG 58139 Query 451214 -AATTATAA--AGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || ||||| ||||||| | ||| | | || || ||| ||||| ||||| |||| Sbjct 58138 CAAGTATAAGGAGGTGAAGAAAGAACCCTCTCCCCAGAGGAAGTTTCAGCTATGATTCTC 58079 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 | || ||||| || | || ||| ||| | ||| |||| ||||||| || Sbjct 58078 ATCAAGATGAAGGAGATTGCTGAAGCCTATCTCGGTAGAGACGTTAAGCATGCAGTTATC 58019 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| || || |||||||||||| ||||| | |||||||| || ||||| || || Sbjct 58018 ACTGTCCCAGCATATTTCAATGATTCACAAAGACAAGCAACCAAGGATGCCGGTTTGATC 57959 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 ||||| |||| ||| || | | || || || ||| | || ||||| Sbjct 57958 GCTGG---------TCTTGTAATGAT-----ATACAACTGCTGCAGCTATTGCCTATGGT 57913 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 | ||| | | ||| | || ||| || || ||| | || || ||| |||||||||| Sbjct 57912 AT-GGACA---AGAAGCA--AGGAGAGAAGAACATTATCGTCTTCGATCTTGGTGGAGGT 57859 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 ||| ||| || | ||| | ||||| |||| || || || || || || | Sbjct 57858 ACTTTCGATGTCTCCCTTCTTACTATTGATAATGGAGTTTTCGAGGTCGTCGCTACTAGC 57799 Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 |||||||| ||| | |||||||||||| | ||| Sbjct 57798 GGTGATACCCATTTGGGAGGTGAAGATTTCGAT 57766 >seq490 Length=125892 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 |||||||| | ||||| || ||| ||||||||||| |||||||| |||||| |||| Sbjct 58251 ATGAATATATATGTTAAGACCTTGAGTGGTAAAACTAAAACTCTTGAGGTTGAAGAATCT 58192 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || |||||| ||| | | |||| ||| ||||| | | | |||| ||||||||| Sbjct 58191 GACTCAATTGAAATTATAAGAGAAAAGATTTTGGATAAAGGATGGGTTCCACCTGATCAA 58132 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 | | | ||| || |||| ||||| ||||||||| |||| ||||| || Sbjct 58131 GTGAGACTGGTCTTCAACGGCAAACTTCTTGAGGATGGAAGATATTTGAGTGATTACAAC 58072 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | || || | ||||||||||| || Sbjct 58071 ATTTAAAATGAGTCTACACTTCACTTGGT 58043 >seq3525 Length=54936 Score = 100 bits (110), Expect = 1e-15 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | |||||||| |||| | |||||| ||||||| || || ||||||||||| || Sbjct 24006 TGAGACCATTGAAGAATTTAAGCTTAAAATTTAAGATAAAGAGGGCATTCCTCCTGACCA 24065 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||| | ||||| || |||| | || | || || ||||| || |||| || || || Sbjct 24066 ACAAAGATTAATATTTGCAGGTATGTAATTAGAGGACGGAAGGACATTGGGAGACTACAA 24125 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 |||| | | || ||||||| || ||||| | ||||| ||||| Sbjct 24126 TATTTAAACAGAGTCAACACTCCATTTAGTTCTTAGACTCAGAGG 24170 >seq259 Length=203576 Score = 100 bits (110), Expect = 1e-15 Identities = 157/222 (71%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 |||||||| | | ||||| | || | |||||||| |||| |||| | | | | || Sbjct 72979 TTTAAGAGAAA-ATTAAAAGCTGAAATCAAAGTAGCCTAATTGTCAGGATATATTGCAGA 73037 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTT---AATGGGAGCAATAATTGGAATGGC 364741 | |||||||||||| |||||| |||||| |||| ||||| | ||||| Sbjct 73038 GCACACAGCTTATCATCATGGTGAGATAAGTTTGCAAATGACTATAATAAAT---ATGGC 73094 Query 364742 ACAAAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAG 364801 | || |||||||||||||||| ||| | |||||| | |||| | || ||||||| | Sbjct 73095 ATAAGATTTTGTTGGAAGTAACAATCTCAATTTATTGCAACCTATTGGTTAATTTGGTAC 73154 Query 364802 TCGAGTAATGGGAGGTAAAGATTCTGCCAGCCCACGTTATAT 364843 | || | |||||||| ||||| || || || || | ||||| Sbjct 73155 TAGAATGATGGGAGGGAAAGAGTCCGCAAGTCCGAGATATAT 73196 >seq1609 Length=68617 Score = 93.3 bits (102), Expect = 2e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 407574 AAATCTATATCAGAAAGATTAAAAGGTAAGTTAGGACGGGTTCGTAATAATTTAATGGGA 407633 ||| ||||| || ||| ||| ||| || ||| | ||||| || ||||||||| Sbjct 19982 AAAGCTATAAGAGCCAGACTAAGAGGCAAAGAAGGTAGAGTTCGAGGAAACTTAATGGGA 20041 Query 407634 AAACGACAAGATTATTGTGCTCGTTCCGTTATTACAGGAGATCCTGATGTAAATATTGAT 407693 ||| || || | || ||| ||||| || || ||| ||||| | || | ||||| Sbjct 20042 AAAAGAGTTGACTTTTCTGCACGTTCTGTGATAACACCTGATCCAAACTTAGAGCTTGAT 20101 Query 407694 GAAATAGGAATACCTTTAGCAGTAGCTAAAAATATTACTTTTCCAGAAATTGTAACACCC 407753 | ||||| |||| | ||| | ||| |||| | ||| | |||||| |||||||||| Sbjct 20102 TAGCTAGGAGTACCGATGGCAATCGCTCAAAACGTAACTATCCCAGAAGTTGTAACACCA 20161 Query 407754 CAAAATATAGATGAGTTAAGTAAATTAGTTTTAAATGGA 407792 | |||||||| |||||||| | ||||| |||||| Sbjct 20162 TAGAATATAGACGAGTTAAGAAGGCTAGTTGAGAATGGA 20200 >seq17194 Length=120762 Score = 91.5 bits (100), Expect = 6e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 || || || || |||||||| ||||| || ||||||||| | | || ||| | || ||| Sbjct 43967 AAGATCCAGGACAAGGAAGGTATTCCACCCGATCAACAAAGACTCATCTTCGCCGGTAAA 43908 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 ||||||||||| || ||||||||| || || || || | ||||| | || || ||| Sbjct 43907 CAACTTGAAGACGGCAGAACTTTGAGCGACTACAACATCCAAAAGGAGTCTACTCTCCAC 43848 Query 391254 TTAGTATTAAGACTGAGAGG 391273 || || | ||||| ||||| Sbjct 43847 TTGGTCCTCAGACTTAGAGG 43828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975067326697760