Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq3105 104 5e-17 >seq3105 Length=6724 Score = 104 bits (114), Expect = 5e-17 Identities = 138/190 (73%), Gaps = 10/190 (5%) Strand=Plus/Minus Query 150603 TTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGG---TGCGACTGGCGGCG 150659 ||||||| ||||| ||||| || ||||| ||| | || || || ||| ||||| Sbjct 6724 TTATTCTATTCATTGATGAGATTCATACCATTGTAGGAGCAGGAGGTGCATCTGGC---- 6669 Query 150660 GTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCGTGTCA 150719 || || ||| |||||||| ||||||||| || | | |||||||||| || Sbjct 6668 --TCATTAGATGCTTCGAATATGTTTAAACCTGCTTTAGCCAGAGGTGAAATTCAATGCA 6611 Query 150720 TCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGCACTACAGC 150779 | || ||||| || | |||||||||||| || ||||||||||||||| |||| || | | Sbjct 6610 TTGGAGCAACTACGTTAGATGAATATCGTCAATACATTGAAAAAGATGGAGCATTAGATC 6551 Query 150780 GTCG-TTTCA 150788 | || ||||| Sbjct 6550 GACGCTTTCA 6541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147212225928560