Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq19259 244 7e-59 seq92 163 2e-34 seq18779 123 2e-22 seq2143 107 1e-17 seq20086 105 4e-17 seq10467 105 4e-17 seq6376 105 4e-17 seq5238 105 4e-17 seq1293 105 4e-17 seq259 105 4e-17 seq979 100 2e-15 seq5958 95.1 8e-14 seq4749 95.1 8e-14 seq2762 87.8 1e-11 >seq19259 Length=46844 Score = 244 bits (270), Expect = 7e-59 Identities = 528/782 (68%), Gaps = 12/782 (2%) Strand=Plus/Plus Query 475382 CATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTTCAAG 475441 ||| | || ||||||||||| || || |||||||| | || |||| || |||||| Sbjct 31864 CATTTGGGAGGTGAAGATTTCGACAACAGACTTGTCGACTATTGCGTTGCTGAATTCAAG 31923 Query 475442 AGGAAAAATAAAGTTGATCTTTCAAC--ATCTGCTAAAGCATTAAGACGTCTTAGAACTG 475499 | ||| | | |||| | |||| | || | |||| | ||| | || |||||| Sbjct 31924 AAGAAGACTGGTATTGACAT--CAACGGAAACGCCAGAGCACTCAGAAGACTCAGAACTC 31981 Query 475500 CTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATT 475559 || || || ||| || |||||| |||| |||| | | ||||| || Sbjct 31982 AATGCGAGAAGGCAAAGAGAATTCTTTCAGCTGCCCATCAAGCCCCAATTGAATGCGAAA 32041 Query 475560 CTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTT 475619 ||||| ||| || || | || |||| || |||| ||||| || || || | | Sbjct 32042 CTCTTGCTGAGGGTGAAGACTTCAACACTCAAATCTCAAGAGCTAAGTTCGAGGAACTCT 32101 Query 475620 GTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAAC 475679 || |||||||| |||||| || |||||| ||| | || || | || || | Sbjct 32102 GTATGGATCTCTTCAGAAAATGTATGCCACCCGTAGAAAACGTCCTTAAGGACTCAGGCC 32161 Query 475680 TTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAA 475739 | | ||| |||| |||| ||| |||| | || || |||||||| ||||| || || Sbjct 32162 TCGCCAAGGGACAAATCCACGAAGTTGTCTTGGTTGGTGGTTCAACCAGAATCCCCAAGG 32221 Query 475740 TAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAG-TTAAATGA--AAGTGTAAATC 475796 | | ||||||| || | || || || || | |||| || || | || | Sbjct 32222 TTCAACAAATGCTCTCCGACTTCTTCAACGGAAAGACCCTTAACAGATCAA---TCAACC 32278 Query 475797 CTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAG 475856 | |||||||||||||| || || ||||| |||||||| |||||| | | || || || Sbjct 32279 CAGATGAAGCTGTTGCTTACGGTGCTGCCGTCCAAGCTGCTATTCTCACTGGAGAAGGAG 32338 Query 475857 ACGAGAAAC-TAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAA 475915 || || ||| | || || | | ||| | || || || ||||| ||| ||| ||||| Sbjct 32339 AC-AGCAACGTCAAGGATCTCCTCCTTTTGGATGTTACCCCACTCTCAACCGGTATTGAA 32397 Query 475916 ACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAA 475975 || | |||||| | |||||| ||| ||| ||||| ||| | |||||| ||| || Sbjct 32398 ACTGCTGGAGGTGTCATGACTGTTCTCATTCCAAGAAACACTACCATCCCAACCAAGAAG 32457 Query 475976 TCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAA 476035 ||| || | || |||| ||| |||| || ||| || ||| || ||| |||| ||| Sbjct 32458 TCACAAATCTTCACCACCTATGCTGACAACCAACCAGGTGTCTTGATTCAAGTCTTCGAA 32517 Query 476036 GGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATT 476095 ||||||||| | | || || ||||| || ||| || | || || ||||||||||| Sbjct 32518 GGTGAAAGATCAATGACCAAGGATAACCACTTACTCGGTAAATTCAACCTTGAAGGTATC 32577 Query 476096 CCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGT 476155 || || ||||||||||| || || ||||| ||||| ||||| ||||||||||| || || Sbjct 32578 CCACCCGCTCCCAGAGGTGTCCCACAAATCGAAGTCACTTTCGATATTGATGCCAACGGA 32637 Query 476156 AT 476157 || Sbjct 32638 AT 32639 >seq92 Length=278201 Score = 163 bits (180), Expect = 2e-34 Identities = 394/585 (67%), Gaps = 21/585 (4%) Strand=Plus/Minus Query 297112 GATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTTGGAAATCTGAT 297171 ||||||||| | ||||||| |||||||||||| | ||||| || || ||| ||||| Sbjct 255916 GATTGGTGTTTCTCAAGAAATAGATATTGGGGTAACCCAATCCCTATCTGGGTTTCTGAA 255857 Query 297172 GATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAATTTTCAGGAATT 297231 || |||||||| | ||| |||||||| || ||||| | ||||| | ||||| | Sbjct 255856 GACATGGAAGAAATTGTATGTGTTGGTTCAATTAAAGAACTTTAAGAACTATCAGGTTGT 255797 Query 297232 GATAATATTAATGATTTACATATTGATAAAATTGATCAAATAAAAATTCCTTCTCGTAAA 297291 | | || | |||| | |||| || | |||||||| || | ||||| || || Sbjct 255796 GGAGAAATCACTGATCTTCATAGAGAAAGTATTGATCATATTACCATTCCATCAAAGCAA 255737 Query 297292 GGAAAAGGCATGTTATCTCGTG--TTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTT 297349 |||||||| ||| | | | || | | || || ||||| ||||| || ||||||| Sbjct 255736 GGAAAAGG--AGTTCTTAAGAGAATTCCAGAAGTATTCGATTGCTGGTTCGAGTCAGGTT 255679 Query 297350 CTATGCCTTATGGTCAAATTCATTATCCTTTTGAAAATTCCGAAATTTTAGACACTTCAC 297409 ||||||| | | | || |||||||||| || | || ||| | || || || Sbjct 255678 CTATGCCATTCGCTTAAGTTCATTATCCATTCAGCATGTCAGAA----GAAACCTTTAAC 255623 Query 297410 AAGATTATATTGCAG---ATTTTATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTT 297466 ||| || | ||| | ||||| | ||| |||| |||| ||||||||||| | Sbjct 255622 CAGA-GAT-TCCCAGCTAACTTTATTGCTGAAGGTCTTGACTAAACCAGAGGTTGGTTCT 255565 Query 297467 ATACTTTATTAGTTCTTTCTACAGCTATATTTAACAAACCAGCATTTAAAAATGTAATTG 297526 ||||||| | || | || || ||| | | || ||| || |||| || ||| | || | Sbjct 255564 ATACTTTGATGGTCATCTCAACCGCTGTCATGAAGAAAGCACCATTCAAGAATTTGATCG 255505 Query 297527 TTACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGTCAAAAAGT-AAAG-GTAATTA 297584 ||| || |||||| || | |||||| |||||||||| ||||| |||| ||||| Sbjct 255504 TTAATGGTATTGTTTTAGCTCCAGATGGATAAAAAATGTC--AAAGTCAAAGAAAAATTA 255447 Query 297585 TCCTGATCCAAATATTTTGATGGATAAATATGGTGCAGATACTTTACGTCTTTATTTATT 297644 || ||||||| || || |||| | || || ||| ||| | | ||||||| Sbjct 255446 CCCAGATCCAATGCTTATGGCTCATAACTTCGGAGCTGATGCTTGCAGATTATATTTAT- 255388 Query 297645 ATCAACA--CCTGTAGTTAAAGCCGAATCAATTAAATTTGATGAA 297687 ||||| || || || | ||| ||| || | || ||| |||| Sbjct 255387 -GCAACAGTCCAGTTGTGAGAGCTGAACCACTCAACTTTACTGAA 255344 >seq18779 Length=42783 Score = 123 bits (136), Expect = 2e-22 Identities = 128/165 (78%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || ||||| ||||||||||||||||||||||||||| || | ||||||||| || ||| Sbjct 12850 AGGGTTCTTCCATCTTCAAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGGGGA 12791 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724 || |||||||| ||||| ||||| ||||| ||||||||| || | || | || Sbjct 12790 ATACCTTCCTTATCTTGGATCTTGGCCTTGACGTTTTCAATAGTGTCTGATGGCTCAA-C 12732 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || ||||| ||||| ||||| ||||| Sbjct 12731 ATCAAGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTG 12687 Score = 120 bits (132), Expect = 2e-21 Identities = 127/165 (77%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || ||||| ||||||||||||||||||||||||||| || | ||||||||| || || Sbjct 13078 AGGGTTCTTCCATCTTCAAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGTGGG 13019 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724 || |||||||||||||| |||||| |||||| ||||| ||||| | | | | Sbjct 13018 ATACCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTATCTGAAGGCTCGACG 12959 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||| ||| || || || ||||| || ||||| ||||| ||||| Sbjct 12958 TCCAA-GGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATTTG 12915 Score = 107 bits (118), Expect = 1e-17 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| |||||||| ||||| || || || | ||||||||| || || |||||||||||| Sbjct 12610 TCTTCGAGTTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGTGGGATTCCTTCCTTG 12551 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAAGGGTAAT 480736 ||||| ||||| |||||| ||| || || |||| | | | || | ||| | | || Sbjct 12550 TCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGGCTCAACGTCCAAAG-TGAT 12492 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||||||||| ||||| Sbjct 12491 GGTCTTGCCTGTGAGGGTCTTAACGAAGATTTG 12459 Score = 96.9 bits (106), Expect = 2e-14 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 |||||| |||||||||||||| ||||| || ||||| | ||||||||| || || || Sbjct 13303 GTTCTGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGTTGATCGGGTGGGATA 13244 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTC 480727 ||||||||||| | ||||| || || |||||| || || | || | || || Sbjct 13243 CCTTCCTTGTCCTAGATCTTGGCCTTCACGTTTTCAATGGTGTCTGATGGCTCAA-CATC 13185 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || ||||| || ||||| ||||| ||||| Sbjct 13184 GAGGGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATTTG 13143 >seq2143 Length=26640 Score = 107 bits (118), Expect = 1e-17 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| |||||||| ||||| || || || | ||||||||| || || |||||||||||| Sbjct 6571 TCTTCGAGTTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGTGGGATTCCTTCCTTG 6630 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAAGGGTAAT 480736 ||||| ||||| |||||| ||| || || |||| | | | || | ||| || || Sbjct 6631 TCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGGCTCAACGTCCAA-AGTGAT 6689 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||||||||| ||||| Sbjct 6690 GGTCTTGCCTGTGAGGGTCTTAACGAAGATTTG 6722 Score = 96.9 bits (106), Expect = 2e-14 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || ||||| ||||||||||||||||||||||||||| || | ||||||||| || ||| Sbjct 6072 AGGGTTCTTCCATCTTCAAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGGGGA 6131 Query 480666 ATTCCTTCCTTGTCTTGAATCTT 480688 || |||||||| ||||| ||||| Sbjct 6132 ATACCTTCCTTATCTTGGATCTT 6154 Score = 87.8 bits (96), Expect = 1e-11 Identities = 118/162 (73%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 |||||| |||||||||||||| ||||| || ||||| | ||||||||| || || || Sbjct 5848 GTTCTGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGTTGATCGGGTGGGATA 5907 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTC 480727 ||||||||||| | ||||| || || |||||| || || | || | || | Sbjct 5908 CCTTCCTTGTCCTAGATCTTGGCCTTCACGTTTTCAATGGTGTCTGATGGCTCAACATCG 5967 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||| || || || ||||| || ||||| ||||| ||||| Sbjct 5968 A--GGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATTTG 6007 >seq20086 Length=32257 Score = 105 bits (116), Expect = 4e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | |||||| ||||| | | |||||||||||| || || | ||| Sbjct 22150 TTGTAATCAGACAAGGTTCTGCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTCTGT 22091 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||| ||||| |||||||||||||| || || ||| || |||||| Sbjct 22090 TGATCAGGGGGAATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCA 22031 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | ||||| |||||||| |||||||| | |||||| ||||| || Sbjct 22030 GAAGGCTCTACATCAAGAGTAATAGTCTTACCGGTCAAAGTCTTGACGAAGAT 21978 >seq10467 Length=17661 Score = 105 bits (116), Expect = 4e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | |||||| ||||| | | |||||||||||| || || | ||| Sbjct 3789 TTGTAATCAGACAAGGTTCTGCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTCTGT 3730 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||| ||||| |||||||||||||| || || ||| || |||||| Sbjct 3729 TGATCAGGGGGAATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCA 3670 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | ||||| |||||||| |||||||| | |||||| ||||| || Sbjct 3669 GAAGGCTCTACATCAAGAGTAATAGTCTTACCGGTCAAAGTCTTGACGAAGAT 3617 Score = 105 bits (116), Expect = 4e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | |||||| ||||| | | |||||||||||| || || | ||| Sbjct 13865 TTGTAATCAGACAAGGTTCTGCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTCTGT 13924 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||| ||||| |||||||||||||| || || ||| || |||||| Sbjct 13925 TGATCAGGGGGAATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCA 13984 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | ||||| |||||||| |||||||| | |||||| ||||| || Sbjct 13985 GAAGGCTCTACATCAAGAGTAATAGTCTTACCGGTCAAAGTCTTGACGAAGAT 14037 >seq6376 Length=13110 Score = 105 bits (116), Expect = 4e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | |||||| ||||| | | |||||||||||| || || | ||| Sbjct 12187 TTGTAATCAGACAAGGTTCTGCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTCTGT 12128 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||| ||||| |||||||||||||| || || ||| || |||||| Sbjct 12127 TGATCAGGGGGAATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCA 12068 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | ||||| |||||||| |||||||| | |||||| ||||| || Sbjct 12067 GAAGGCTCTACATCAAGAGTAATAGTCTTACCGGTCAAAGTCTTGACGAAGAT 12015 >seq5238 Length=45295 Score = 105 bits (116), Expect = 4e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | |||||| ||||| | | |||||||||||| || || | ||| Sbjct 21998 TTGTAATCAGACAAGGTTCTGCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTCTGT 21939 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||| ||||| |||||||||||||| || || ||| || |||||| Sbjct 21938 TGATCAGGGGGAATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCA 21879 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | ||||| |||||||| |||||||| | |||||| ||||| || Sbjct 21878 GAAGGCTCTACATCAAGAGTAATAGTCTTACCGGTCAAAGTCTTGACGAAGAT 21826 >seq1293 Length=7053 Score = 105 bits (116), Expect = 4e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | |||||| ||||| | | |||||||||||| || || | ||| Sbjct 6476 TTGTAATCAGACAAGGTTCTGCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTCTGT 6417 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||| ||||| |||||||||||||| || || ||| || |||||| Sbjct 6416 TGATCAGGGGGAATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCA 6357 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | ||||| |||||||| |||||||| | |||||| ||||| || Sbjct 6356 GAAGGCTCTACATCAAGAGTAATAGTCTTACCGGTCAAAGTCTTGACGAAGAT 6304 >seq259 Length=203576 Score = 105 bits (116), Expect = 4e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 355401 TGTGAAGATATATCGTGCACTTGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTG 355460 |||| ||||||||| | |||||| ||||| ||||| | | ||| |||||||||| Sbjct 73203 TGTGTAGATATATCTCGGACTTGCGGACTCTTTCCCTCCCATCATTCTAGTACCAAATTA 73144 Query 355461 ACCATTGGGAAGTAATAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTAT 355520 |||| | || | |||||||| | ||||||||||||||| ||| || |||||| ||||| Sbjct 73143 ACCAATAGGTTGCAATAAATTGAGATTGTTACTTCCAACAAAATCTTATGCCATATTTAT 73084 Query 355521 TATAGT 355526 |||||| Sbjct 73083 TATAGT 73078 >seq979 Length=120341 Score = 100 bits (110), Expect = 2e-15 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 318643 ATACCATTATCACCATAAACACATTGAATCAATTTATCATTAGCATTTCTTACAGTACCA 318702 ||||||| ||||| |||| ||| ||| | | || || | | |||||||||| ||| Sbjct 77721 ATACCATCCTCACCGTAAAGGAATTAAATAATCTGTTCTTTTGAAGTTCTTACAGTTCCA 77780 Query 318703 TCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATAACCTGTG 318762 ||||| | ||| | | |||||||| |||| || |||||| | ||||| || Sbjct 77781 TCATACTTCACCATCACGTCTTCTAGAGCCTTAATCAAACGTCTTTGAATGTAACCAGTT 77840 Query 318763 TCTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAAAAG 318822 ||||||||||||| || |||| ||| | ||| || | ||| ||||| | ||||| ||| Sbjct 77841 TCTGCAGTTTTAACTGCTGTATCAATGAGACCCTCACGACCTCCCATAGCATGGAAGAAG 77900 Query 318823 AATTC 318827 ||||| Sbjct 77901 AATTC 77905 >seq5958 Length=11399 Score = 95.1 bits (104), Expect = 8e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 ||||||||||||| ||||| ||||| ||||| | ||||| || || ||||| || | || Sbjct 2487 TTACTGTTCCAGCTTATTTCAATGACTCTCAGAGACAAGCTACCAAGGATGCTGGTAAAA 2428 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | ||| |||| | ||| | || || || || ||||| || |||||||| || | | Sbjct 2427 TCGCAAATCTTGAAGTTAAGAGAATCATCAACGAGCCAACTGCTGCCGCACTCGCCTTCG 2368 Query 474864 GTCTTGATAAGA 474875 |||||||||||| Sbjct 2367 GTCTTGATAAGA 2356 Score = 91.5 bits (100), Expect = 1e-12 Identities = 190/283 (67%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 475886 GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATT 475945 || || || ||||| ||| | |||||||| || | || || ||||||| || || || Sbjct 1691 GATGTTACCCCACTCTCACTCGGTCTTGAGACCCTCGGTGGTGTTATGACCAAGCTCATC 1632 Query 475946 GACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAAT 476005 ||||| ||| | |||||| ||| || ||| |||| || || || | |||| || Sbjct 1631 ATGAGAAACACTACCATCCCAACCAAGAAGTCACAAGTCTTCTCAACAGCTGCTGACAAC 1572 Query 476006 CAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAAC 476065 ||||| | ||| |||| | | | | ||||||| ||| || | || || ||||| Sbjct 1571 CAAACCAAGGTATCCATTAAGGTATATCAAGGTGAGAGAGAAATGGCTGCTGACAATAAA 1512 Query 476066 AAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATT 476125 | | ||| || | || | |||||| || ||||| ||||| || |||| Sbjct 1511 TCATTGGGAGAATTCGAACTCGGAGGTATCCCAATGGCTCCAAGAGGTCACCCATAAATC 1452 Query 476126 GAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTA 476168 ||||| | || ||||||||||| || ||||| | || |||| Sbjct 1451 GAAGTCTCCTTCGATATTGATGCCAACGGTATCTTGAACGTTA 1409 >seq4749 Length=38707 Score = 95.1 bits (104), Expect = 8e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 ||||||||||||| ||||| ||||| ||||| | ||||| || || ||||| || | || Sbjct 21209 TTACTGTTCCAGCTTATTTCAATGACTCTCAGAGACAAGCTACCAAGGATGCTGGTAAAA 21268 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | ||| |||| | ||| | || || || || ||||| || |||||||| || | | Sbjct 21269 TCGCAAATCTTGAAGTTAAGAGAATCATCAACGAGCCAACTGCTGCCGCACTCGCCTTCG 21328 Query 474864 GTCTTGATAAGA 474875 |||||||||||| Sbjct 21329 GTCTTGATAAGA 21340 Score = 91.5 bits (100), Expect = 1e-12 Identities = 190/283 (67%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 475886 GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATT 475945 || || || ||||| ||| | |||||||| || | || || ||||||| || || || Sbjct 22005 GATGTTACCCCACTCTCACTCGGTCTTGAGACCCTCGGTGGTGTTATGACCAAGCTCATC 22064 Query 475946 GACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAAT 476005 ||||| ||| | |||||| ||| || ||| |||| || || || | |||| || Sbjct 22065 ATGAGAAACACTACCATCCCAACCAAGAAGTCACAAGTCTTCTCAACAGCTGCTGACAAC 22124 Query 476006 CAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAAC 476065 ||||| | ||| |||| | | | | ||||||| ||| || | || || ||||| Sbjct 22125 CAAACCAAGGTATCCATTAAGGTATATCAAGGTGAGAGAGAAATGGCTGCTGACAATAAA 22184 Query 476066 AAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATT 476125 | | ||| || | || | |||||| || ||||| ||||| || |||| Sbjct 22185 TCATTGGGAGAATTCGAACTCGGAGGTATCCCAATGGCTCCAAGAGGTCACCCATAAATC 22244 Query 476126 GAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTA 476168 ||||| | || ||||||||||| || ||||| | || |||| Sbjct 22245 GAAGTCTCCTTCGATATTGATGCCAACGGTATCTTGAACGTTA 22287 >seq2762 Length=67969 Score = 87.8 bits (96), Expect = 1e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 476006 CAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAAC 476065 ||||||||||| ||||| || |||| ||||||||||||| | || || ||||| | Sbjct 55187 CAAACAACTGTCACCATTTAAGTCTTCGAAGGTGAAAGAACCATGACCAATGATAACCAT 55128 Query 476066 AAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATT 476125 | || | || |||| ||||| || || || || ||||||||||| |||||| Sbjct 55127 TTGTTAGGTAAATTCGATCTCACTGGTATCCCACCCGCCCCAAGAGGAGTTCCCCAAATT 55068 Query 476126 GAAGTTACTTTTGATATTGATGCAAA 476151 ||||| ||||| || || |||| ||| Sbjct 55067 GAAGTCACTTTCGAAATCGATGAAAA 55042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267075944406560