Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq5378 89.7 2e-14 seq2465 89.7 2e-14 >seq5378 Length=38208 Score = 89.7 bits (98), Expect = 2e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 ||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| Sbjct 25103 GTAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCCCGGG 25045 >seq2465 Length=57876 Score = 89.7 bits (98), Expect = 2e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 ||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||||| Sbjct 18712 GTAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATCCCGGG 18654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15845141309400