Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F000711775.1_202014-06-25] 25,720 sequences; 496,291,018 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq17288 113 6e-20 >seq17288 Length=143976 Score = 113 bits (124), Expect = 6e-20 Identities = 151/207 (73%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||| ||||| | || ||||| ||||| |||||| |||||| Sbjct 116978 GCAAAGTCAGTGTGCATACCTTCGTCTCTTGAAATGAGCTCATTTGAGAAGGTGAGACCT 116919 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||||||| || |||||||| | |||||| || | || || || || ||||||||||| Sbjct 116918 GGCATGAGGCCACGCTTCTTAAGCCAGAAGATTGAGCAGAAGGATCCTGAGAAGAAGATG 116859 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG-GAGCGGGACTTTGTATCAAA 130194 ||||| | | ||||| |||| || | |||||| ||| |||| || | | ||| Sbjct 116858 CCCTCGATAGCAGCGAAAGCAATTAGTCTCTCAGCGAAGCTAGCG---CTCT-CACCAAT 116803 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTT 130221 |||||| || ||||| | ||||| || Sbjct 116802 CCACTTAATGGCCCATTCAGCCTTCTT 116776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618236373083200