Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq18203 86.0 6e-12 >seq18203 Length=1365 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/222 (69%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || || || | ||| || ||||| || |||||||| ||| || ||| | ||| Sbjct 389 AGAACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGACAAGGTTCTTCCGTCT 330 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || || |||||||| ||| |||| | | || || || || ||||||||||| ||||| Sbjct 329 TCGAGTTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGTGGGATTCCTTCCTTGTCT 270 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||| || ||||| | || | || || | || ||| | ||| | || | ||| Sbjct 269 TGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGGCTCAACGTCCAAAGTGATGGTC 210 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTATTTT 131244 || || || || || || ||||| || |||||| ||||||| Sbjct 209 TTGCCTGTGAGGGTCTTAACGAAGATTTGCATG-TTTATTTT 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471880294206720