Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq14202 86.0 4e-12 >seq14202 Length=1113 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || |||| || | || || || ||||| ||| | || || | || Sbjct 426 ATGCAAATCTTCGTTAAGACCCTTACCGGAAAGACCATCACCCTTGACGTCGAGCCATCA 485 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | ||||| ||| || |||||||| ||| | || | ||| Sbjct 486 GACACCATTGAAAACGTTAAGGCAAAGATCCAAGATAAAGAAGGTATCCCACCCGATCAA 545 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||||||||||| || ||||| ||||| |||||| || ||| | | || |||||| Sbjct 546 CAAAGACTTATCTTCGCCGGCAAGCAACTTGAAGATGGAAGAACCCTTTCAGACTACAAT 605 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || |||||||| ||||| |||| | | || ||||||| Sbjct 606 ATTCAAAAAGAATCTACCCTTCACTTGGTTCTTAGATTGAGAGGAGG 652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358026778780132