Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq22165 95.1 1e-14 >seq22165 Length=1746 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/190 (72%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 126064 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTT 126123 ||| ||||| | || ||||| ||||| |||||| || ||||||||||| || ||||| Sbjct 610 ACCTTCGTCTCTTGAAATGAGCTCATTTGAGAAGGTGAGACCTGGCATGAGGCCACGCTT 669 Query 126124 CTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAA 126183 ||| | |||||| || | || || || || ||||||||||| ||||| | ||||| Sbjct 670 CTTAAGCCAGAAGATTGAGCAGAAGGATCCTGAGAAGAAGATGCCCTCGATGGCAGCGAA 729 Query 126184 CGCAAAGAGACGCTCAGCAAAG-GAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACT 126242 |||| || | |||||| ||| ||||| | ||| |||||| || ||||| | Sbjct 730 AGCAATTAGTCTCTCAGCGAAGCTAGCGC----TCTCACCAATCCACTTAATGGCCCATT 785 Query 126243 GCGCCTTTTT 126252 ||||| || Sbjct 786 CAGCCTTCTT 795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597185907910640