Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1587 201 9e-46 seq4020 150 1e-30 seq16738 132 4e-25 seq14202 125 6e-23 seq18988 113 4e-19 seq18203 105 5e-17 seq981 105 5e-17 seq12272 100 2e-15 seq2444 96.9 3e-14 seq163 89.7 4e-12 >seq1587 Length=5298 Score = 201 bits (222), Expect = 9e-46 Identities = 372/536 (69%), Gaps = 15/536 (3%) Strand=Plus/Minus Query 368584 GATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGAT 368643 ||||||||| | || |||| ||| | ||||| | ||||| ||| | ||| ||||| Sbjct 2225 GATTGGTGTTTCTCTAGAAATAGATACTGGGGTAACCCAATCCCAATTTGGGTTTCTGAA 2166 Query 368644 GATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGT-GT 368702 ||| ||||||||||| ||| | ||||||||||||||| | |||||||||| ||| || Sbjct 2165 GATATGGAAGAAATTGTATGTGTTGGTTCAATTAAAGAACTTTAAGAATTATCAGGTTGT 2106 Query 368703 GCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAA 368762 | | || || | |||| | |||| || | |||||||| |||| |||||||||||| | Sbjct 2105 GGAGAA-ATCACTGATCTCCATAGAGAAAGCATTGATCATATTACCATTCCATCAAAGCA 2047 Query 368763 AGGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTC 368822 ||||||||| | | || || || ||| || ||||||||||| || |||||||| Sbjct 2046 AGGAAAAGGAGTTCTTAAGAGAATTCCAGAAGTATTCGATTGCTGGTTCGAGTCAGGTTC 1987 Query 368823 TATGCCTTATGGTCAAATACATTATCCATTT--GATAACGCAAAATACTTTGATAATGAT 368880 |||||| | | | || | |||||||||||| || | || | || || ||| Sbjct 1986 TATGCCATTCGCTTAAGTTCATTATCCATTTAGCATGTCAGAAGAAACCTT--TAA--CC 1931 Query 368881 AAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTAT 368940 | ||||| ||| | ||| | | ||| ||||| ||||| | |||||||| ||| Sbjct 1930 AGAGATT-CCCAGCTAACTTTATTGCTGAAGGTCTTGATTAAACAAGAGGTTGGTTCTAT 1872 Query 368941 ACCCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTA 369000 ||| || | || | || || ||| | | | ||| | || || ||| | || || Sbjct 1871 ACCTTAATGGTCATCTCAACTGCTGTCATGAAGAAAGAACCATTCAAGAATTTGATTGTT 1812 Query 369001 ACTGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAAAGTAAGGGTAATTATTCC 369060 | ||| |||||| || || ||||| |||||||||||| ||| ||||| | Sbjct 1811 AATGGAATTGTTTTGGCTTCAGATGGATCAAAGATGTCAAAGTCAAAGAAAAATTACCCA 1752 Query 369061 GATCCTAATATTTTAATTG---ATAAATTTGGTGCTGATACTTTGAGATTATACCT 369113 ||||| ||| || |||| |||| || || |||||| ||| |||||||| || Sbjct 1751 GATCC-AATGCTT--ATTGCTCATAACTTCGGAGCTGATGCTTGCAGATTATATCT 1699 >seq4020 Length=2623 Score = 150 bits (166), Expect = 1e-30 Identities = 260/375 (69%), Gaps = 2/375 (1%) Strand=Plus/Minus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || |||||||| |||||||| || ||||| || | ||||| |||||||| ||||| || Sbjct 1105 AACCCAGATGAAGCTGTTGCTTACGGTGCTGCCGTCCAAGCTGCTATTCTCACTGGAGAA 1046 Query 552270 ACTGATGAAAAACTACAAA-ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTT 552328 || | ||| ||| || | | ||| | |||||||| || || || ||| | Sbjct 1045 GGAGAC-AGCAACGTCAAGGATCTCCTCCTTTTGGATGTTACCCCACTCTCAACCGGTAT 987 Query 552329 AGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAA 552388 ||||| | ||||||| | |||||| ||| || ||||| ||||| || || || Sbjct 986 TGAAACTGCTGGAGGTGTCATGACTGTTCTCATTCCAAGAAACACTACCATCCCAACCAA 927 Query 552389 AAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTT 552448 || || | | || | || ||| | || || ||| | | ||| |||||| | || Sbjct 926 GAAGTCACAAATCTTCACCACCTATGCTGACAACCAACCAGGTGTCTTGATTCAAGTCTT 867 Query 552449 TGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGG 552508 ||||| |||||| | | || || ||||| | ||| |||| || || | ||||| Sbjct 866 CGAAGGTGAAAGATCAATGACCAAGGATAACCACTTACTCGGTAAATTCAACCTTGAAGG 807 Query 552509 TATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAA 552568 ||| || || ||||| | || || || ||||| ||||| ||||||||||| |||||||| Sbjct 806 TATCCCACCCGCTCCCAGAGGTGTCCCACAAATCGAAGTCACTTTCGATATTGATGCCAA 747 Query 552569 TGGAATTTTGAATGT 552583 ||||| ||||| || Sbjct 746 CGGAATCTTGAACGT 732 Score = 120 bits (132), Expect = 2e-21 Identities = 389/591 (66%), Gaps = 15/591 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || |||||| | || ||||| || ||| || ||||| |||| || | ||| Sbjct 2182 GCTATTGGAATAGATCTCGGCACCACTTACTCTTGCGTAGGTGTGTGGCTCAACGACAAA 2123 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| || |||| |||||||| |||| || |||||||| || || ||||||| Sbjct 2122 GTAGAAATCATCCCCAACGATCAAGGAAACAACACCACTCCATCATACGTCGCTTTCACT 2063 Query 550112 GAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| || | | ||| |||| || |||| || |||||| || | || || | || Sbjct 2062 GAAGAAGAGAGACTTA-TTGGAGACTCAGCCAAGAATCAAGTTGCTAGAAACCCCAAGAA 2004 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | || || || || | | || ||||||| || ||| | |||| | Sbjct 2003 CACCGTCTTCGACGCCAAGAGACTTATCGGAAGAAAATTCTCTGAGAAGCAAATTCAAGA 1944 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATG---TTTCTGGAAAACCTTATATTGA 550287 || |||||||||||||| ||| | | | | | ||| || || |||| Sbjct 1943 CGACATGAAGCATTGGCCATTCAAGGTCGAGCAAGGACCAGCTGACAAGCCAGTCATTGT 1884 Query 550288 AG-CTACTCATGAAGGATCTGTTAAACAATTTTCAC-CAGAACAAATTTCATCTATGGTT 550345 | | ||| |||| | || || || ||| | ||| |||| ||||||||||| Sbjct 1883 TGTCGACT--ACAAGGGTGAAGCCAAGAAGTTCCACGCTGAAGAAATCTCATCTATGGTC 1826 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTC-AAGA-AGTTACGGATGCAG 550403 || || || ||||| ||| || |||| | || || |||| || | | | || | Sbjct 1825 TTGATCAAGATGAAGGAAATCGCTGAAGCTTATCTT--TCAAAGACTGTCAAGAACGCTG 1768 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | || ||||| ||||| ||||| || |||||||| | ||||| || || |||||||| Sbjct 1767 TTATCACTGTCCCAGCTTATTTCAACGACTCACAGAGACAAGCCACCAAGGATGCTGGTA 1708 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 || | || | || ||||| | || ||||| || || |||||||| || |||| | Sbjct 1707 CCATCTCAGGTATGAACGTTCTCAGAATCATCAACGAGCCAACTGCTGCCGCTATTGCTT 1648 Query 550524 ATGGACTTGATAA-ACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 | || | || || | || || ||||| || || |||||||| ||| Sbjct 1647 ACGGTTTGGACAAGAAATCAT-CCCAAGAGAAAAACGTTCTCATCTTCGAT 1598 >seq16738 Length=2328 Score = 132 bits (146), Expect = 4e-25 Identities = 317/477 (66%), Gaps = 2/477 (0%) Strand=Plus/Plus Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTT 552174 ||||| | || || |||||||| || || ||||| || || ||| || | | | Sbjct 1230 ATGAAGTCGTACTCGTTGGTGGTTCAACTAGAATCCCCAAGGTTCAATAATTAATCAAGG 1289 Query 552175 CTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATG 552234 || |||||||| || || ||| | || |||| |||||||| || || ||||| | Sbjct 1290 ATTTCTTCAATGGAAAGGAACCAAACAGAGGTATTAACCCAGATGAAGCCGTCGCCTACG 1349 Query 552235 GTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAA-AAACTACAAAATATT 552293 | || ||| |||||| | ||| | || ||||| || |||||| || ||||| Sbjct 1350 GAGCTGCAGTTCAAGGTGGAATTTTAGGAGGTGAAACTTCAGAGGAAACTA-AAGATATT 1408 Query 552294 GTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACT 552353 | | | ||||| || || || | || ||| | || || ||||||||| | ||||| Sbjct 1409 CTTTTGATCGATGTAACCCCACTTACCCTCGGTATTGAGACCGTTGGAGGTGTCATGACC 1468 Query 552354 AATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTAT 552413 || | ||| | ||| ||| || || | || || |||| || |||| ||| Sbjct 1469 AAGATCATCAACAGAGGTACCGTCATCCCAGGAAAGAAGTCTCAAACCTTCACTACCTAT 1528 Query 552414 TCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAA 552473 ||| | ||||| |||| || |||||| | || ||||| ||||||| | || || Sbjct 1529 CAAGACCAACAAACCACTGTCACCATTCAAGTCTTCGAAGGTGAAAGAACCATGACCAAG 1588 Query 552474 GATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTA 552533 ||||| || | |||| || || | ||||| || || || || | ||||| Sbjct 1589 GATAACCATTTGTTAGGTAAATTCGATCTCACTGGTATCCCACCCGCCCCAAGAGGAGTT 1648 Query 552534 CCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || ||||||||||| |||||||| ||||||| || || |||| ||| |||||| Sbjct 1649 CCCCAAATTGAAGTCACTTTCGAAATCGATGAAAACTCCATATTGAGTGTCACTGCT 1705 Score = 111 bits (122), Expect = 1e-18 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 550319 TCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTT 550378 || ||||| || ||||| ||||| || | || || ||||| | | || || | | Sbjct 581 TCCCCAGAGGAAGTTTCAGCTATGATTCTCATCAAGATGAAGGAGATCGCTGAAGCCTAT 640 Query 550379 GTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAA 550438 | ||| ||| || | | ||||||| || ||||| ||||||||||| ||||| |||||| Sbjct 641 CTCGGTAGAGACGTAAAGCATGCAGTTATCACTGTCCCAGCATATTTCAATGATTCACAA 700 Query 550439 CGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAAT 550498 | ||||| || || ||||| || || ||||| || ||||| | | || |||||| Sbjct 701 AGACAAGCAACCAAGGATGCCGGCTTGATCGCTGGTCTCGATGTTTTGAGAATCATCAAT 760 Query 550499 GAACCTACTGCTGCTGCACTTGCATATGG 550527 || || |||||||| || |||| ||||| Sbjct 761 GAGCCAACTGCTGCAGCTATTGCCTATGG 789 >seq14202 Length=1113 Score = 125 bits (138), Expect = 6e-23 Identities = 156/210 (74%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||||||| |||||| ||||||||| || | || |||||| |||||||| Sbjct 632 CAAG-TGAAGGGTAGATTCTTTTTGAATATTGTAGTCTGAAAGGGTTCTTCCATCTTCAA 574 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 |||| || ||||| || ||||||||||| ||||| || || || |||||||||||||| | Sbjct 573 GTTGCTTGCCGGCGAAGATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTGGA 514 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTA 563445 | ||| || || ||||| || || | || || || || || | || || Sbjct 513 TCTTTGCCTTAACGTTTTCAATGGTGTCTGATGGCTCGAC-GTCAAGGGTGATGGTCTTT 455 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || ||||| || |||||||| ||||||||| Sbjct 454 CCGGTAAGGGTCTTAACGAAGATTTGCATA 425 Score = 86.0 bits (94), Expect = 5e-11 Identities = 149/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| |||||||| ||| | ||| || ||||| || | || ||||| ||||| Sbjct 404 CAAG-TGAAGGGTTGACTCCTTCTGG--ATGTTGTAGTCGGAGAGGGTTCTGCCGTCTTC 348 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | || ||||| || ||||| ||||| || ||||| || || ||||| ||||| ||||| Sbjct 347 CAACTGCTTTCCAGCGAAAATGAGTCTCTGTTGATCGGGTGGGATTCCCTCTTTGTCTTG 288 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 || || || || ||||| ||||| | || |||| | ||||| | || | Sbjct 287 GATCTTAGCCTTGACATTTTCAATGGTATCTGATGGCTCAACAT-CAAGAGTGATGGTCT 229 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| ||||||||||||| ||| Sbjct 228 TGCCAGTGAGAGTCTTAACGAAAATTTACAT 198 >seq18988 Length=5971 Score = 113 bits (124), Expect = 4e-19 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGT-CATTGGCATTTCTTACGGTACC 390869 ||||||| |||||||| | ||||||| ||| ||| | || | | ||||||| || || Sbjct 2998 ATACCATCCTCACCATAGAGGAATTGAAT-AATCTGTTCTTTTGAAGTTCTTACAGTTCC 2940 Query 390870 ATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGT 390929 |||||||| || | | |||||| | |||| || |||||| || |||||||| Sbjct 2939 ATCATACTTCACCATGACGTCTTCCAGAGCCTTAATCAAACGTCTTTGAATGTAACCAGT 2880 Query 390930 GTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAA 390989 ||||||||||| | ||| |||| ||| | |||||| | ||| ||||| | |||||||| Sbjct 2879 TTCTGCAGTTTTGACTGCTGTATCAATGAGACCTTCACGACCTCCCATAGCATGGAAGAA 2820 Query 390990 AAATTC 390995 ||||| Sbjct 2819 GAATTC 2814 >seq18203 Length=1365 Score = 105 bits (116), Expect = 5e-17 Identities = 152/211 (72%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| |||||||| ||| ||||| || ||||| ||| || |||||| |||||| Sbjct 612 CAAG-TGAAGGGTTGACTCCTTTTGG--ATGTTGTAGTCACTAAGGGTTCTTCCATCTTC 556 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 |||||| ||||| |||||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct 555 AAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGGGGAATACCTTCCTTATCTTG 496 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTT 563444 || || || || ||||| || || | | | || | ||| | || || Sbjct 495 GATCTTGGCCTTGACGTTTTCAATAGTGTCTGATGGCTCAACGTCCAAAGTGATGGTCTT 436 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || ||||| ||||||||| Sbjct 435 TCCAGTGAGGGTCTTCACGAAGATTTGCATA 405 Score = 105 bits (116), Expect = 5e-17 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 563262 GAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATC 563321 ||| || | |||||| ||| |||||| || ||||| || | |||||||| ||| Sbjct 846 GAGGACCAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGAAAGAGTTCTGCCATC 787 Query 563322 TTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATC 563381 ||||||||| |||||||| || || |||||||| ||||| || || || ||||| || || Sbjct 786 TTCAAGTTGCTTTCCGGCGAAGATGAGTCTTTGTTGATCGGGTGGGATACCTTCCTTGTC 727 Query 563382 TTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAG 563440 ||| || ||| || || |||||| ||||| | | || | | || || | | Sbjct 726 TTGGATCTTTGCCTTGACATTCTCAATGGTATCTGAAGGCTCGACGTCCAAG-GTGATGG 668 Query 563441 TTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || ||||| || || ||||| ||||||||| Sbjct 667 TCTTTCCGGTAAGGGTCTTGACGAAGATTTGCATA 633 >seq981 Length=3351 Score = 105 bits (116), Expect = 5e-17 Identities = 231/342 (68%), Gaps = 33/342 (10%) Strand=Plus/Plus Query 1047316 CAAATTATATATCCTTGTATGCAAGTAGCAGATATTTTTGAATTAAATCCAAATGGAATT 1047375 |||||||| ||||| || |||||| ||||||||||| || || | | Sbjct 2661 CAAATTATGTATCCATGCATGCAATGTGCAGATATTTTCTTCTTGAAGGC---------T 2711 Query 1047376 GATATTTGTCAACTTGGTGTTGATCAAAGAAAAGTTAATATGTTAGCCATTGAATA-TGC 1047434 ||| | || ||| | ||| | ||||||||||| |||||||||||||||| || || ||| Sbjct 2712 GATGTATGCCAATTGGGTATGGATCAAAGAAAGGTTAATATGTTAGCCAGAGAGTACTGC 2771 Query 1047435 TAAACGTAATAATTTAAAAACACC--------AATTATTTTATCTCACCATATGTTAATG 1047486 | | ||| | ||||| ||| ||| || | ||||| |||||| | ||| Sbjct 2772 GA----TGATA--TCAAAAAGACCGATAAGCCAATCATAGTGTCTCATCATATGATGATG 2825 Query 1047487 GGATTGA---AAGGTTCCAAAAATAAAATGAGTAAATCTGATCCTGAAAATGCCATATTT 1047543 ||||||| |||| |||| | || ||| |||| ||||||||| || || || Sbjct 2826 GGATTGAAGGAAGG--CCAAGCA-AAGATGTCTAAAAGTGATCCTGATTCCGCTATTTTC 2882 Query 1047544 ATGGAAGATAGTCGTGAAGATATATTTaaaaaaaTACACAAAGCATATTGCACAGACGAA 1047603 |||||||||| | ||||||| | || ||| || | || || | ||| || | | Sbjct 2883 ATGGAAGATACTGTTGAAGATGTCAATAGAAAGATTAAGAAGGCTTTCTGCCCACCAGCA 2942 Query 1047604 ATTATT---GATAATCCAATTTATGAATATATCAAATATATT 1047642 |||||| |||||||||||| || ||| | | ||| ||| Sbjct 2943 ATTATTAAAGATAATCCAATTGTGGACTATGTTAGATACATT 2984 >seq12272 Length=3781 Score = 100 bits (110), Expect = 2e-15 Identities = 272/407 (67%), Gaps = 12/407 (3%) Strand=Plus/Plus Query 344257 TTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAACT 344316 ||||| || ||||| || || || | || ||| |||| || || | || || |||| Sbjct 458 TTATCACCAACCATATGCTTTAGTCTTTAATAGAATGTAGGTCCTAAAAAGATCAAAACT 517 Query 344317 TCCATTCTTTGTCCC-GTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGTCC 344375 || | |||| | || || | ||| |||||||| ||||||||| || || || || Sbjct 518 TCAAA-CTTTCTACCAGTAAATCCGTTATACATGACTTCATTTCCATATCTTTGATAGCC 576 Query 344376 TAAAGCTACTAAATCA-TCATTAATTTTATTAATATTAACTCCTGTAAATGGAGTTGCAT 344434 ||| | | || | | | | |||||| || | ||| || || |||||||||| Sbjct 577 TAATTC-ATGAAGTAACTAACTAATTTCATCCACATTCTACCCACAGAAAGGAGTTGCAT 635 Query 344435 CTCCAT-ATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACCT 344493 | || | | | || ||||| || | ||||||| || || |||||||| || || || Sbjct 636 CACCTTCAGAACCATTTAA-TGAAGCTACTTTACTTAACAAGCATTCAATCAAATGCCCA 694 Query 344494 ATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTGAT 344553 || ||||| | | || ||| || |||||||| ||| ||||| |||| || ||| | Sbjct 695 ATTGTCATTCTTGAAGGGATAGCATGAGGATTAACAATCATATCTGGAACTACACCTTCT 754 Query 344554 TTTGTGAATGGAAGA---TCTGCACGATGAATTTTAAATCCAACTGTTCCTTTTTGTCCA 344610 | |||||||| ||| ||| | || | | || ||| || ||||||| ||| Sbjct 755 CTAGTGAATGGTAGATCCTCTTGTCTATAAGTCATA---CCACAAGTACCTTTTTAACCA 811 Query 344611 GCTCTTGATGAGAATTTATCACCTACTGCTGGAATTCTTTCTGATCT 344657 | || | |||||||||||| | | ||||||||| ||| ||| Sbjct 812 TGACGAGAGGCGAATTTATCACCAATTTATGGAATTCTCACTGCTCT 858 >seq2444 Length=2464 Score = 96.9 bits (106), Expect = 3e-14 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 550311 AACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCA 550370 |||||| |||||| ||||||| || | ||||| || || ||||| | || || Sbjct 1801 AACAATACTCACCATCACAAATTGGTGCTTTCGTTTTGATAAAGATGAAGGAGACTGCTG 1742 Query 550371 GTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 |||| | | ||| || | | | ||| || || | ||||| ||||| ||||| |||| Sbjct 1741 AAGCTTATCTAGGTAAATCAATCAAGGAGGCTGTTGTTACTGTTCCAGCTTATTTCAATG 1682 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 |||| || | |||||||| || |||||||| || || ||| | ||| | | Sbjct 1681 ACTCCCAGAGACAAGCTACCAAGGATGCTGGTAAAATCGCAAATCTTGAAGTTAAGAGAA 1622 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | ||||| || || |||||||||||||| || | || |||||||| Sbjct 1621 TCATCAACGAGCCAACTGCTGCTGCACTCGCCTTCGGTCTTGATAA 1576 >seq163 Length=3510 Score = 89.7 bits (98), Expect = 4e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 723242 AAATTATTATATTAGATGAAGCAGATTCTATGACTGATGAAGCTCAAGATGCACTTCGTG 723301 |||||||||| | |||||||| |||||||||||| ||| ||||||| ||| ||| | Sbjct 615 AAATTATTATTCTCGATGAAGCCGATTCTATGACTATTGATGCTCAAGCTGCCCTTAGAA 674 Query 723302 TTATTATTGAACAATATAGTACAACTACGCGATTTTGTTTTATCTGTAATTATATTTCCA 723361 || || || |||||| ||||| ||| |||| || |||| || || || || |||| Sbjct 675 GAATCATAGAGCAATATTCTACAAATACCAGATTCTGCATTATTTGCAACTACATCTCCA 734 Query 723362 AAATAACCGATGCTATAAAATCAAGATGT 723390 | || | ||| || | ||||||||| Sbjct 735 AGATCATAGATCCTCTCGCTTCAAGATGT 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028108319674420