Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq4020 244 7e-59 seq1587 179 2e-39 seq16738 145 5e-29 seq10351 127 1e-23 seq18203 122 6e-22 seq14202 116 2e-20 seq15364 105 4e-17 seq533 105 4e-17 seq18988 102 5e-16 seq2444 100 2e-15 seq981 93.3 3e-13 >seq4020 Length=2623 Score = 244 bits (270), Expect = 7e-59 Identities = 528/782 (68%), Gaps = 12/782 (2%) Strand=Plus/Minus Query 475382 CATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTTCAAG 475441 ||| | || ||||||||||| || || |||||||| | || |||| || |||||| Sbjct 1516 CATTTGGGAGGTGAAGATTTCGACAACAGACTTGTCGACTATTGCGTTGCTGAATTCAAG 1457 Query 475442 AGGAAAAATAAAGTTGATCTTTCAAC--ATCTGCTAAAGCATTAAGACGTCTTAGAACTG 475499 | ||| | | |||| | |||| | || | |||| | ||| | || |||||| Sbjct 1456 AAGAAGACTGGTATTGACAT--CAACGGAAACGCCAGAGCACTCAGAAGACTCAGAACTC 1399 Query 475500 CTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATT 475559 || || || ||| || |||||| |||| |||| | | ||||| || Sbjct 1398 AATGCGAGAAGGCAAAGAGAATTCTTTCAGCTGCCCATCAAGCCCCAATTGAATGCGAAA 1339 Query 475560 CTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTT 475619 ||||| ||| || || | || |||| || |||| ||||| || || || | | Sbjct 1338 CTCTTGCTGAGGGTGAAGACTTCAACACTCAAATCTCAAGAGCTAAGTTCGAGGAACTCT 1279 Query 475620 GTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAAC 475679 || |||||||| |||||| || |||||| ||| | || || | || || | Sbjct 1278 GTATGGATCTCTTCAGAAAATGTATGCCACCCGTAGAAAACGTCCTTAAGGACTCAGGCC 1219 Query 475680 TTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAA 475739 | | ||| |||| |||| ||| |||| | || || |||||||| ||||| || || Sbjct 1218 TCGCCAAGGGACAAATCCACGAAGTTGTCTTGGTTGGTGGTTCAACCAGAATCCCCAAGG 1159 Query 475740 TAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAG-TTAAATGA--AAGTGTAAATC 475796 | | ||||||| || | || || || || | |||| || || | || | Sbjct 1158 TTCAACAAATGCTCTCCGACTTCTTCAACGGAAAGACCCTTAACAGATCAA---TCAACC 1102 Query 475797 CTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAG 475856 | |||||||||||||| || || ||||| |||||||| |||||| | | || || || Sbjct 1101 CAGATGAAGCTGTTGCTTACGGTGCTGCCGTCCAAGCTGCTATTCTCACTGGAGAAGGAG 1042 Query 475857 ACGAGAAAC-TAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAA 475915 || || ||| | || || | | ||| | || || || ||||| ||| ||| ||||| Sbjct 1041 AC-AGCAACGTCAAGGATCTCCTCCTTTTGGATGTTACCCCACTCTCAACCGGTATTGAA 983 Query 475916 ACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAA 475975 || | |||||| | |||||| ||| ||| ||||| ||| | |||||| ||| || Sbjct 982 ACTGCTGGAGGTGTCATGACTGTTCTCATTCCAAGAAACACTACCATCCCAACCAAGAAG 923 Query 475976 TCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAA 476035 ||| || | || |||| ||| |||| || ||| || ||| || ||| |||| ||| Sbjct 922 TCACAAATCTTCACCACCTATGCTGACAACCAACCAGGTGTCTTGATTCAAGTCTTCGAA 863 Query 476036 GGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATT 476095 ||||||||| | | || || ||||| || ||| || | || || ||||||||||| Sbjct 862 GGTGAAAGATCAATGACCAAGGATAACCACTTACTCGGTAAATTCAACCTTGAAGGTATC 803 Query 476096 CCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGT 476155 || || ||||||||||| || || ||||| ||||| ||||| ||||||||||| || || Sbjct 802 CCACCCGCTCCCAGAGGTGTCCCACAAATCGAAGTCACTTTCGATATTGATGCCAACGGA 743 Query 476156 AT 476157 || Sbjct 742 AT 741 Score = 123 bits (136), Expect = 2e-22 Identities = 389/591 (66%), Gaps = 15/591 (3%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| || ||| | || || |||||| ||| |||| ||| |||| || | ||| Sbjct 2182 GCTATTGGAATAGATCTCGGCACCACTTACTCTTGCGTAGGTGTGTGGCTCAACGACAAA 2123 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| || |||| || ||||| || | || || |||||||| || |||| ||| Sbjct 2122 GTAGAAATCATCCCCAACGATCAAGGAAACAACACCACTCCATCATACGTCGCTTTCACT 2063 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 ||| || ||||||||||| | || || |||||| ||| || || || Sbjct 2062 GAAGAAGAGAGACTTATTGGAGACTCAGCCAAGAATCAAGTTGCTAGAAACCCCAAGAAC 2003 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || || || || ||| | || || | || || ||| | | ||| Sbjct 2002 ACCGTCTTCGACGCCAAGAGACTTATCGGAAGAAAATTCTCTGAGAAGCAAATTCAAGAC 1943 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATG--TTGGTGGTAAACCATATATAGAA 474625 || ||| |||||||| || ||||| || || | | || || ||| || | Sbjct 1942 GACATGAAGCATTGGCCATTCAAGGTCGAGCAAGGACCAGCTGACAAGCCAGTCATTGTT 1883 Query 474626 G--CAATACACGCAGGTGAAACTAAACAATTTTCAC-CGGAACAAATTTCTTCAATGGTT 474682 | | |||| | |||||| | || || || ||| | ||| |||| || || ||||| Sbjct 1882 GTCGACTACAAG--GGTGAAGC-CAAGAAGTTCCACGCTGAAGAAATCTCATCTATGGTC 1826 Query 474683 TTAGCCAAAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCA 474739 || ||| ||||| ||| ||| |||| |||||| | |||| || | | || Sbjct 1825 TTGATCAAGATGAAGGAAATCGCTGAAGCT--TATCTTTCA-AAGACTGTCAAGAACGCT 1769 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || || ||||| ||||| ||||| || || || || | ||||| || || ||||| || Sbjct 1768 GTTATCACTGTCCCAGCTTATTTCAACGACTCACAGAGACAAGCCACCAAGGATGCTGGT 1709 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 | || ||||| | || ||| | | || || || || ||||| || ||||| ||||| Sbjct 1708 ACCATCTCAGGTATGAACGTTCTCAGAATCATCAACGAGCCAACTGCTGCCGCTATTGCT 1649 Query 474860 TATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 || ||| | || ||||| || | |||| ||| ||| | ||||| ||| Sbjct 1648 TACGGTTTGGACAAGAAATCATCCCAAGAGAAAAACGTTCTCATCTTCGAT 1598 >seq1587 Length=5298 Score = 179 bits (198), Expect = 2e-39 Identities = 340/491 (69%), Gaps = 17/491 (3%) Strand=Plus/Minus Query 297112 GATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTTGGAAATCTGAT 297171 ||||||||| | || |||| |||||| ||||| | ||||| ||||||||| ||||| Sbjct 2225 GATTGGTGTTTCTCTAGAAATAGATACTGGGGTAACCCAATCCCAATTTGGGTTTCTGAA 2166 Query 297172 GATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAATTTTCAGGAATT 297231 ||| |||||||| | ||| |||||||| || ||||| | ||||||| ||||| | Sbjct 2165 GATATGGAAGAAATTGTATGTGTTGGTTCAATTAAAGAACTTTAAGAATTATCAGGTTGT 2106 Query 297232 GATAATATTAATGATTTACATATTGATAAAATTGATCAAATAAAAATTCCTTCTCGTAAA 297291 | | || | |||| | |||| || | |||||||| || | ||||| || || Sbjct 2105 GGAGAAATCACTGATCTCCATAGAGAAAGCATTGATCATATTACCATTCCATCAAAGCAA 2046 Query 297292 GGAAAAGGCATGTTATCTCGTG--TTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTT 297349 |||||||| ||| | | | || | | || || ||||| ||||| || ||||||| Sbjct 2045 GGAAAAGGA--GTTCTTAAGAGAATTCCAGAAGTATTCGATTGCTGGTTCGAGTCAGGTT 1988 Query 297350 CTATGCCTTATGGTCAAATTCATTATCCTTTTGAAAATTCCGAAATTTTAGACACTTCAC 297409 ||||||| | | | || |||||||||| ||| | || ||| | || || || Sbjct 1987 CTATGCCATTCGCTTAAGTTCATTATCCATTTAGCATGTCAGAA----GAAACCTTTAAC 1932 Query 297410 AAGATTATATTGCAG---ATTTTATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTT 297466 ||| || | ||| | ||||| | ||| ||||| |||||||||||||||| | Sbjct 1931 CAGA-GAT-TCCCAGCTAACTTTATTGCTGAAGGTCTTGATTAAACAAGAGGTTGGTTCT 1874 Query 297467 ATACTTTATTAGTTCTTTCTACAGCTATATTTAACAAACCAGCATTTAAAAATGTAATTG 297526 |||| ||| | || | || || ||| | | || ||| | |||| || ||| | |||| Sbjct 1873 ATACCTTAATGGTCATCTCAACTGCTGTCATGAAGAAAGAACCATTCAAGAATTTGATTG 1814 Query 297527 TTACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGTCAAAAAGT-AAAG-GTAATTA 297584 ||| ||||||||| || | |||||| ||| ||||| ||||| |||| ||||| Sbjct 1813 TTAATGGAATTGTTTTGGCTTCAGATGGATCAAAGATGTC--AAAGTCAAAGAAAAATTA 1756 Query 297585 TCCTGATCCAA 297595 || ||||||| Sbjct 1755 CCCAGATCCAA 1745 >seq16738 Length=2328 Score = 145 bits (160), Expect = 5e-29 Identities = 251/362 (69%), Gaps = 6/362 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || || |||||||| || |||| | |||||| |||| || Sbjct 1325 AACCCAGATGAAGCCGTCGCCTACGGAGCTGCAGTTCAAGGTGGAATTTTAGGAGGTGAA 1384 Query 475853 ---TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 ||||| || ||||||| | |||| | | | || ||||| |||||| | | ||| Sbjct 1385 ACTTCAGAGGA--AACTAAAGA-TATTCTTTTGATCGATGTAACCCCACTTACCCTCGGT 1441 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 |||| || |||||||| | ||||| || | || ||||| ||| |||||| | Sbjct 1442 ATTGAGACCGTTGGAGGTGTCATGACCAAGATCATCAACAGAGGTACCGTCATCCCAGGA 1501 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 || || || || || | || ||| || | ||||| ||||| ||||| ||| || Sbjct 1502 AAGAAGTCTCAAACCTTCACTACCTATCAAGACCAACAAACCACTGTCACCATTCAAGTC 1561 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089 || ||||||||||||| | || || ||||| | | || | || |||| Sbjct 1562 TTCGAAGGTGAAAGAACCATGACCAAGGATAACCATTTGTTAGGTAAATTCGATCTCACT 1621 Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 ||||| || || || || ||||||||||| ||||||||||| ||||| || || |||| | Sbjct 1622 GGTATCCCACCCGCCCCAAGAGGAGTTCCCCAAATTGAAGTCACTTTCGAAATCGATGAA 1681 Query 476150 AA 476151 || Sbjct 1682 AA 1683 Score = 114 bits (126), Expect = 8e-20 Identities = 194/277 (70%), Gaps = 7/277 (3%) Strand=Plus/Plus Query 474605 GGTGGTAAACCATATATAGAAG--CAA-TACACGCAGGTGAAACTAAACAAT--TTTCAC 474659 ||||| |||||||| || ||| ||| || | | ||||||| ||| || | || | Sbjct 527 GGTGGCAAACCATACATTAAAGTGCAAGTATAAGGAGGTGAAG--AAAGAACCCTCTCCC 584 Query 474660 CGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTG 474719 | || || |||| | ||| || | ||| ||||| | | ||| | ||||| | Sbjct 585 CAGAGGAAGTTTCAGCTATGATTCTCATCAAGATGAAGGAGATCGCTGAAGCCTATCTCG 644 Query 474720 GACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTC 474779 | ||| |||| ||||||| || ||||| ||||||||||| |||||||| ||| | | Sbjct 645 GTAGAGACGTAAAGCATGCAGTTATCACTGTCCCAGCATATTTCAATGATTCACAAAGAC 704 Query 474780 AAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAAC 474839 ||||||| || ||||| || || || ||||| ||||||| | || || ||||| | Sbjct 705 AAGCAACCAAGGATGCCGGCTTGATCGCTGGTCTCGATGTTTTGAGAATCATCAATGAGC 764 Query 474840 CAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 |||| || || || |||| |||||| | || ||||| Sbjct 765 CAACTGCTGCAGCTATTGCCTATGGTATGGACAAGAA 801 >seq10351 Length=6027 Score = 127 bits (140), Expect = 1e-23 Identities = 250/366 (68%), Gaps = 8/366 (2%) Strand=Plus/Minus Query 318643 ATACCATTATCACCATAAACACATTGAATCAATTTATCATTAGCATTTCTTACAGTACCA 318702 || |||| || ||||| | ||||||| | || || | ||| || |||||||| Sbjct 2790 ATTCCATCCTCTCCATATAAGAATTGAATGACTTACTCTCCTGAATTCCTCACAGTACCG 2731 Query 318703 TCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATAACCTGTG 318762 ||||||| || | ||||||||||| ||| || | | ||||||| | ||| ||||| Sbjct 2730 TCATATTTTACCATGATATCTTCTAGAGCTTTTACGAGTCTTCTTTGAATATATCCTGTT 2671 Query 318763 TCTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAAAAG 318822 || | ||||| | || |||| ||||| |||||| | |||| ||||| | ||||||||| Sbjct 2670 TCCGATGTTTTGACTGCTGTATCAATAAGACCTTCACGTCCTCCCATAGCATGGAAAAAG 2611 Query 318823 AATTCAGCAGGTCCTAAACCTTTAATA-AATGAACTTGGACAAAAACCTCTAGCTAAAGC 318881 ||||| | ||| |||| || | ||| ||| | ||| ||||||| ||| |||| Sbjct 2610 AATTCTGGAGGATCTAACCCACTGATATAATTATTAATGAC-AAAACCTTTAG---AAGC 2555 Query 318882 ---ACTGTCATCATGTTGTGCAAACATTGGAAGAGTTCTATTATTAAATCTCTTTTGAAT 318938 || | |||||| | || || || | ||||||| ||||| | ||||| Sbjct 2554 TGGACCATAATCATGCTTTGGGAAGTGAGGTAAAGTTCTAGATTTAAAGCCAAATTGAAC 2495 Query 318939 TCTTTTATCTTCGACAATAACTTGACCAATACAACCTGCTATTTGTCCAGCATTCATATC 318998 ||||||| |||| ||| | || || | |||||| |||||| | ||| |||| Sbjct 2494 TCTTTTACCTTCAACATTCTGTTAGCCGACACAACCCATAATTTGTGAAATATTAATATT 2435 Query 318999 GGTACC 319004 ||||| Sbjct 2434 TGTACC 2429 >seq18203 Length=1365 Score = 122 bits (134), Expect = 6e-22 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 480560 GAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATC 480619 ||| || | |||||| ||| |||||| | || || || | ||||||||| ||| Sbjct 846 GAGGACCAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGAAAGAGTTCTGCCATC 787 Query 480620 TTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTC 480679 ||||||||||||||| || || || || | ||||||||| || || || ||||||||||| Sbjct 786 TTCAAGTTGCTTTCCGGCGAAGATGAGTCTTTGTTGATCGGGTGGGATACCTTCCTTGTC 727 Query 480680 TTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAG 480738 ||| |||||| |||||| ||||| ||||| | | | | | ||| ||| || | Sbjct 726 TTGGATCTTTGCCTTGACATTCTCAATGGTATCTGAAGGCTCGACGTCCAA-GGTGATGG 668 Query 480739 TTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || ||||| ||||| ||||| Sbjct 667 TCTTTCCGGTAAGGGTCTTGACGAAGATTTG 637 Score = 120 bits (132), Expect = 2e-21 Identities = 127/165 (77%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || ||||| ||||||||||||||||||||||||||| || | ||||||||| || ||| Sbjct 572 AGGGTTCTTCCATCTTCAAGTTGCTTTCCAGCAAAAATGAGTCTTTGTTGATCGGGGGGA 513 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724 || |||||||| ||||| ||||| ||||| ||||||||| || | || | || Sbjct 512 ATACCTTCCTTATCTTGGATCTTGGCCTTGACGTTTTCAATAGTGTCTGATGGCTCAACG 453 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||| || || || || || ||||| ||||| ||||| ||||| Sbjct 452 TCCAA-AGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTG 409 Score = 107 bits (118), Expect = 1e-17 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| |||||||| ||||| || || || | ||||||||| || || |||||||||||| Sbjct 332 TCTTCGAGTTGCTTGCCAGCGAAGATGAGTCTTTGTTGATCGGGTGGGATTCCTTCCTTG 273 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAAGGGTAAT 480736 ||||| ||||| |||||| ||| || || |||| | | | || | ||| | | || Sbjct 272 TCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGGCTCAACGTCCAAAG-TGAT 214 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||||||||| ||||| Sbjct 213 GGTCTTGCCTGTGAGGGTCTTAACGAAGATTTG 181 Score = 100 bits (110), Expect = 2e-15 Identities = 121/162 (75%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 |||||| |||||||||||||| ||||| || ||||| | ||||||||| || || || Sbjct 1025 GTTCTGCCGTCTTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGTTGATCGGGTGGGATA 966 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTC 480727 ||||||||||| | ||||| || || |||||| || || | || | || || Sbjct 965 CCTTCCTTGTCCTAGATCTTGGCCTTCACGTTTTCAATGGTGTCTGATGGCTCAA-CATC 907 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || |||||||| ||||| ||||| ||||| Sbjct 906 GAGGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATTTG 865 >seq14202 Length=1113 Score = 116 bits (128), Expect = 2e-20 Identities = 153/207 (74%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| ||||| ||| |||||| || ||| || || | || ||||| |||||||| Sbjct 632 CAAG-TGAAGGGTAGATTCTTTTTGAATATTGTAGTCTGAAAGGGTTCTTCCATCTTCAA 574 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||||||| || || || ||||| | ||||||||| || || || ||||| || ||||| | Sbjct 573 GTTGCTTGCCGGCGAAGATAAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTGGA 514 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGT-GAAGTTTCAAGGGTAATAGTTTT 480742 ||||| || || |||||| || || | || | || | |||||||| || || || Sbjct 513 TCTTTGCCTTAACGTTTTCAATGGTGTCTGATGGCTCGACG--TCAAGGGTGATGGTCTT 456 Query 480743 ACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || ||||||||||| ||||| Sbjct 455 TCCGGTAAGGGTCTTAACGAAGATTTG 429 Score = 113 bits (124), Expect = 3e-19 Identities = 125/164 (76%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || |||||| ||||| | ||||||||||| ||||| || | |||||||| || || Sbjct 364 AGGGTTCTGCCGTCTTCCAACTGCTTTCCAGCGAAAATGAGTCTCTGTTGATCGGGTGGG 305 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724 ||||| || |||||||| ||||| |||||| |||||| ||||| | || | || Sbjct 304 ATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTATCTGATGGCTCAA-C 246 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTT 480768 ||||| || || || || || |||||||||||||||||||||| Sbjct 245 ATCAAGAGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAAATTT 202 Score = 87.8 bits (96), Expect = 1e-11 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 480608 AGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAAT 480667 ||||||| ||||||||||| || || || || || || | ||||||||| || ||||| Sbjct 818 AGTTCTGCCGTCTTCAAGTTGTTTACCGGCGAAGATGAGTCTTTGTTGATCGGGTGGAAT 759 Query 480668 TCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTT 480726 ||||||||||| || ||||| ||||||| || || || || | || | | | Sbjct 758 ACCTTCCTTGTCCTGGATCTTGGCTTTGACATTCTCGATGGTGTCGGATGGTTCGACGTC 699 Query 480727 CAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 ||| || ||||| |||||||| | ||||| ||||| || Sbjct 698 CAA-AGTGATAGTCTTACCGGTCAAGGTCTTCACGAAGAT 660 >seq15364 Length=4951 Score = 105 bits (116), Expect = 4e-17 Identities = 201/290 (69%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 355240 GTTGAATATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGT 355299 ||||| | || || ||||||||||||| ||||||| | | | ||| | || || Sbjct 2282 GTTGACCAACCTGTTCCAATACCTTCTGCACCATTAATAAGCACTAATGGTAAAACTGGA 2341 Query 355300 ACATAAAATACTGGTTCAAT-CATTTTATTATCTTCAAATTGATGTTGCAATACATCAAA 355358 ||||||||| | || ||||| | || | ||||||| || || | || | | Sbjct 2342 ACATAAAATTCAGGCTCAATTCCCATTCCT-TCTTCAATTTAATACTTTAACAGTGGATC 2400 Query 355359 ATCATGTTGT-ATGAAA-ATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCGT 355416 ||| ||| | || ||| | | || | | || || | | | |||| ||||||||| Sbjct 2401 ATC--GTTCTCATTAAATAGAGATCTTGCAAAGGGAGTTAAATTTGTGTAGATATATCTC 2458 Query 355417 GCACTTGCATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAAT 355476 | |||||| ||||| ||||| | | ||| ||||||||||||||| | || ||| Sbjct 2459 GGACTTGCGGACTCTTTCCCTCCCATCATTCTAGTACCAAATTGACCAATAGGCTACAAT 2518 Query 355477 AAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT 355526 ||||| | ||||||||||||||| ||| || |||||| ||||| ||||| Sbjct 2519 AAATTGAGATTGTTACTTCCAACAAAATCTTATGCCATATTTATAATAGT 2568 >seq533 Length=4588 Score = 105 bits (116), Expect = 4e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | |||||| ||||| | | |||||||||||| || || | ||| Sbjct 4265 TTGTAATCAGACAAGGTTCTGCCGTCTTCCAACTACTTTCCAGCAAAGATGAGTCTCTGT 4324 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||| ||||| |||||||||||||| || || ||| || |||||| Sbjct 4325 TGATCAGGGGGAATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCGATGGTATCA 4384 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | ||||| |||||||| |||||||| | |||||| ||||| || Sbjct 4385 GAAGGCTCTACATCAAGAGTAATAGTCTTACCGGTCAAAGTCTTGACGAAGAT 4437 >seq18988 Length=5971 Score = 102 bits (112), Expect = 5e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 318643 ATACCATTATCACCATAAACACATTGAATCAATTTATCATTAGCATTTCTTACAGTACCA 318702 ||||||| |||||||| | ||||||| | | || || | | |||||||||| ||| Sbjct 2998 ATACCATCCTCACCATAGAGGAATTGAATAATCTGTTCTTTTGAAGTTCTTACAGTTCCA 2939 Query 318703 TCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATAACCTGTG 318762 ||||| | ||| | | ||||| || |||| || |||||| | ||||| || Sbjct 2938 TCATACTTCACCATGACGTCTTCCAGAGCCTTAATCAAACGTCTTTGAATGTAACCAGTT 2879 Query 318763 TCTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAAAAG 318822 ||||||||||| | || |||| ||| | |||||| | ||| ||||| | ||||| ||| Sbjct 2878 TCTGCAGTTTTGACTGCTGTATCAATGAGACCTTCACGACCTCCCATAGCATGGAAGAAG 2819 Query 318823 AATTCAGCAGGTCCTAAACC-TTTA-ATAA 318850 ||||| ||| |||||| |||| |||| Sbjct 2818 AATTCTTGAGGAGTTAAACCATTTAGATAA 2789 >seq2444 Length=2464 Score = 100 bits (110), Expect = 2e-15 Identities = 192/283 (68%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 475886 GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATT 475945 || || || ||||| ||| | |||||||| || | || || ||||||| || || || Sbjct 962 GATGTTACCCCACTCTCACTCGGTCTTGAGACCCTCGGTGGTGTTATGACCAAGCTCATC 903 Query 475946 GACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAAT 476005 ||||| ||| | |||||| ||| || ||| |||| || || || | |||| || Sbjct 902 ATGAGAAACACTACCATCCCAACCAAGAAGTCACAAGTCTTCTCAACAGCTGCTGACAAC 843 Query 476006 CAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAAC 476065 ||||| | ||| |||| | | | | ||||||| ||| || | || || ||||| Sbjct 842 CAAACCAAGGTATCCATTAAGGTATATCAAGGTGAGAGAGAAATGGCTGCTGACAATAAA 783 Query 476066 AAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATT 476125 | | ||| || | || | |||||| || ||||| ||||| || ||||| Sbjct 782 TCATTGGGAGAATTCGAACTCGGAGGTATCCCAATGGCTCCAAGAGGTCACCCACAAATC 723 Query 476126 GAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTA 476168 |||||| | || ||||||||||| || ||||| | || |||| Sbjct 722 GAAGTTTCCTTCGATATTGATGCCAACGGTATCTTGAACGTTA 680 Score = 86.0 bits (94), Expect = 4e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 ||||||||||||| ||||| ||||| || || | ||||| || || ||||| || | || Sbjct 1705 TTACTGTTCCAGCTTATTTCAATGACTCCCAGAGACAAGCTACCAAGGATGCTGGTAAAA 1646 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | ||| |||| | ||| | || || || || ||||| || || ||||| || | | Sbjct 1645 TCGCAAATCTTGAAGTTAAGAGAATCATCAACGAGCCAACTGCTGCTGCACTCGCCTTCG 1586 Query 474864 GTCTTGATAAGA 474875 |||||||||||| Sbjct 1585 GTCTTGATAAGA 1574 >seq981 Length=3351 Score = 93.3 bits (102), Expect = 3e-13 Identities = 242/356 (68%), Gaps = 25/356 (7%) Strand=Plus/Plus Query 895161 TTCCAGGAGTAAA-AGATGTTGTCAA-ATTATGGGTCGAAAAGACGGAGATGAATTATCT 895218 || || ||||||| ||||| | || || ||||| |||| || |||||||| | | Sbjct 2596 TTTCAAGAGTAAAGAGATGC-GCCACCATCATGGGCAGAAATGAGGGAGATGATATGCCA 2654 Query 895219 GTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAACCTGAA 895278 | | |||||||||| ||||| ||||||||| |||||||||||| || | |||| Sbjct 2655 GCTGCTCAAATTATGTATCCATGCATGCAATGTGCAGATATTTT----CT---TCTTGAA 2707 Query 895279 GGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTCTCGAA 895338 || ||| | || ||||| ||| | |||||| | || ||||||||| | || || Sbjct 2708 GG--CTGATGTATGCCAATTGGGTATGGATCAAAGAAAGGTTAATATGTTAGCCAGAGAG 2765 Query 895339 TA-TGCCAAGA----AAAATGGATTAAAAGTACCTGTTATACTATCACACCATATGTTAA 895393 || ||| | || |||| | | ||| || | ||| | || || |||||| | | Sbjct 2766 TACTGCGATGATATCAAAAAGACCGATAAG--CCAATCATAGTGTCTCATCATATGATGA 2823 Query 895394 TGGGATT--AGGTGGACCTAAAAATAAAATGAGTAAATCCGATCCTAAATCGGCTATATT 895451 ||||||| ||| | || || || ||| |||| |||||| | || ||||| || Sbjct 2824 TGGGATTGAAGGAAGGCC--AAGCAAAGATGTCTAAAAGTGATCCTGATTCCGCTATTTT 2881 Query 895452 TATGGAAGATTCATATGAAGAAATTAA-AGAAAAAATATTACGTGCTTTTTGCACA 895506 ||||||||| | |||||| | || ||||| | || | | ||||| ||| || Sbjct 2882 CATGGAAGATACTGTTGAAGATGTCAATAGAAAGATTAAGAAG-GCTTTCTGCCCA 2936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267215867413784