Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq12871 84.2 3e-11 seq8201 84.2 3e-11 >seq12871 Length=1282 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 96868 TCCACAGAGATTCGAACTCTGACTGAAGGATTAAAAGTCCCATATGCTACCATTACATCA 96927 |||||||||||||||||||||||| ||||||| | |||||||| ||||||| ||||| || Sbjct 1147 TCCACAGAGATTCGAACTCTGACTAAAGGATTTAGAGTCCCATGTGCTACCCTTACACCA 1088 Query 96928 TAGA 96931 | || Sbjct 1087 TGGA 1084 >seq8201 Length=6604 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 96868 TCCACAGAGATTCGAACTCTGACTGAAGGATTAAAAGTCCCATATGCTACCATTACATCA 96927 |||||||||||||||||||||||| ||||||| | |||||||| ||||||| ||||| || Sbjct 6417 TCCACAGAGATTCGAACTCTGACTAAAGGATTTAGAGTCCCATGTGCTACCCTTACACCA 6358 Query 96928 TAGA 96931 | || Sbjct 6357 TGGA 6354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791684891851280