Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq12272 82.4 1e-10 >seq12272 Length=3781 Score = 82.4 bits (90), Expect = 1e-10 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 194279 AAAAAGGAACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTA 194338 ||||||| ||||||||||||| |||| |||||| ||| | ||||| || | |||| Sbjct 806 AAAAAGGTACTTGTGGTATGACTTATAGACAAGAGGATCTACCATTCACTAGAGAAGGTG 747 Query 194339 TGGTACCAGATATTATTATCAATCCAAATTGTATTCCGTCCAGAATGACCATT 194391 | || |||||||| ||| | ||||| || ||| || || |||||||| ||| Sbjct 746 TAGTTCCAGATATGATTGTTAATCCTCATGCTATCCCTTCAAGAATGACAATT 694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632312044357040