Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq12272 87.8 2e-12 >seq12272 Length=3781 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 193036 AAAAAGGAACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTA 193095 ||||||| ||||||||||||| |||| |||||| ||| | ||||| || | |||| Sbjct 806 AAAAAGGTACTTGTGGTATGACTTATAGACAAGAGGATCTACCATTCACTAGAGAAGGTG 747 Query 193096 TGGTACCAGATATTATTATTAATCCAAATTGTATTCCGTCCAGAATGACCATT 193148 | || |||||||| ||| ||||||| || ||| || || |||||||| ||| Sbjct 746 TAGTTCCAGATATGATTGTTAATCCTCATGCTATCCCTTCAAGAATGACAATT 694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628354755578880