Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq22165 104 3e-17 >seq22165 Length=1746 Score = 104 bits (114), Expect = 3e-17 Identities = 139/190 (73%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 130033 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 130092 ||| ||||| | || ||||| ||||| |||||| |||||||||||||| || ||||| Sbjct 610 ACCTTCGTCTCTTGAAATGAGCTCATTTGAGAAGGTGAGACCTGGCATGAGGCCACGCTT 669 Query 130093 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 130152 ||| | |||||| || | || || || || ||||||||||| ||||| | ||||| Sbjct 670 CTTAAGCCAGAAGATTGAGCAGAAGGATCCTGAGAAGAAGATGCCCTCGATGGCAGCGAA 729 Query 130153 CGCAAAGAGACGCTCAGCAAAG-GAGCGGGACTTTGTATCAAACCACTTCATCGCCCACT 130211 |||| || | |||||| ||| |||| || | | ||| |||||| || ||||| | Sbjct 730 AGCAATTAGTCTCTCAGCGAAGCTAGCG---CTCT-CACCAATCCACTTAATGGCCCATT 785 Query 130212 GCGCCTTTTT 130221 ||||| || Sbjct 786 CAGCCTTCTT 795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618261589778480