Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oxytricha_20trifallax_20[genbank_20GCA_5F001297925.1_202015-09-23] 22,458 sequences; 57,457,034 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq12272 84.2 3e-11 >seq12272 Length=3781 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 63721 AAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA 63780 ||| ||||| | ||| | | ||| ||| |||| ||||||||||| || ||| | Sbjct 870 AAAGTAAAAATGAGAGCAGTGAGAATTCCATAAATTGGTGATAAATTCGCCTCTCGTCAT 811 Query 63781 GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGAC 63840 | | |||||||||| |||||||||| |||| ||||||| ||| | || || || | ||| Sbjct 810 GGTTAAAAAGGTACTTGTGGTATGACTTATAGACAAGAGGATCTACCATTCACTAGAGAA 751 Query 63841 GGTATCGTACCCGATCTCGTCATCAATCCACACGCT 63876 ||| | || || ||| | | | ||||| || ||| Sbjct 750 GGTGTAGTTCCAGATATGATTGTTAATCCTCATGCT 715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666887935314480