Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq56 89.7 4e-13 >seq56 Length=265680 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||| |||| || | ||||| |||||||| || || || || || ||||| || Sbjct 113270 ATGTAAATTTTTGTTAAAACCTTGACGGGAAAGACTATCACACTTGATGTAGAACCTTCA 113329 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| || ||| ||||||||||| | || |||||| Sbjct 113330 GACACCATTGATGCTGTTAAGGCTAAGATTTAAGATAAAGAAGGAATTCCTCCTGATCAA 113389 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| | || ||||| || || ||||| |||||| | |||| | | ||||| || Sbjct 113390 TAAAGATTGATTTTTGCAGGAAAGCAACTTGAAGATGGAAGAACTCTTTCAGATTATAAC 113449 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||| | || ||||| |||||||| | || || ||||| ||||||| Sbjct 113450 ATTTAAAAAGAATCAACTCTTCATTTAGTATTGAGATTAAGAGGAGG 113496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428323753070630