Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq56 86.0 5e-12 seq454 82.4 6e-11 >seq56 Length=265680 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||| |||| || | ||||| |||||||| || || || || || ||||| || Sbjct 113270 ATGTAAATTTTTGTTAAAACCTTGACGGGAAAGACTATCACACTTGATGTAGAACCTTCA 113329 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | | ||| || ||| ||||||||||| | || |||||| Sbjct 113330 GACACCATTGATGCTGTTAAGGCTAAGATTTAAGATAAAGAAGGAATTCCTCCTGATCAA 113389 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||||| | || ||||| || || ||| | |||||| | |||| | | ||||| || Sbjct 113390 TAAAGATTGATTTTTGCAGGAAAGCAACTTGAAGATGGAAGAACTCTTTCAGATTATAAC 113449 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||| |||| ||||| |||||||| | || || ||||| ||||||| Sbjct 113450 ATTTAAAAAGAATCAACTCTTCATTTAGTATTGAGATTAAGAGGAGG 113496 >seq454 Length=44262 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 ||| ||||||||||||||||||| || ||| |||| ||||| | ||| | | || Sbjct 41606 GATTAACAAAGACTTATCTTTGCAGGAAAATAATTAGAAGACGGAAGAACACTTTCAGAC 41547 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || || ||| |||||||||| || |||||| | || || ||||| ||||||| Sbjct 41546 TATAACATTTAAAAGGAATCAACACTTCACTTAGTTTTGAGATTAAGAGGAGG 41494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410785054549244