Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq711 91.5 1e-13 >seq711 Length=17244 Score = 91.5 bits (100), Expect = 1e-13 Identities = 174/255 (68%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 97066 TAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGG 97125 ||||| ||| ||||||| ||||| || | | | ||||| |||| ||| || || Sbjct 10175 TAAATATGAACATCTCCAAAAGTATGCACATAATCTCCTACTTCTAATTCACAAACTTGC 10116 Query 97126 GCGA---TCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCC 97182 || | ||||||| ||| | ||| || |||||||||||||| || || | Sbjct 10115 GCCACCATCATACACAACAAT---GCATAACTCGCAATGTTAAAAGGGACGCCCAAAAAT 10059 Query 97183 ATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGA 97242 | |||||| ||||||||| || || || | |||||||| |||||||||||| Sbjct 10058 ACATCAGCACTTCTTTGATACAATTGTAGTGACAATTTTCCATCTGCTACATAAAACTGA 9999 Query 97243 CTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACAC 97302 |||| ||||||| || | || ||||| ||||||| || ||||||||||| | Sbjct 9998 AACAATGCATGACAAGGCGCTAAAGCCATATTTGGAATTTCGGCTGCATTCCAAGCAGAA 9939 Query 97303 ATCAACATTCTTCTA 97317 | | | ||||||| Sbjct 9938 ACGATAAGTCTTCTA 9924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346774084795220