Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq253 396 4e-105 seq25 389 6e-103 seq379 338 9e-88 seq504 149 9e-31 seq124 96.9 5e-15 seq62 96.9 5e-15 seq33 89.7 7e-13 >seq253 Length=82967 Score = 396 bits (438), Expect = 4e-105 Identities = 667/973 (69%), Gaps = 32/973 (3%) Strand=Plus/Minus Query 49616 AAAAGTCAACATCTAGAGAAAAATGATTATC---TTCTTGAGACATAACTCCCATTTTTT 49672 |||||||| |||| | || ||| ||||| || || | ||| ||||| ||||| Sbjct 29973 AAAAGTCAGCATCCATAGTAAATACTTTATCCTATTTTTTACTCATGACTCCAGCTTTTT 29914 Query 49673 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCA 49732 || || || || | | ||||||||||||||||||| |||| || ||||| | |||| Sbjct 29913 AATAATCTCCAACTCTTCTTTCGAAAAAATTAGTTTTACCTTGTAAAGATATCATATCCA 29854 Query 49733 TGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 49792 | | ||||| ||||| | |||||||||||| | ||| ||| || | || |||| Sbjct 29853 TCCATTCAAAAGGATTCTTTGAATTATAAATTTTAGGAGCTCCTAATGCAAATATTAATC 29794 Query 49793 TATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 49852 |||| || |||||||| |||||| ||||||||| | | ||||||| || || | || | Sbjct 29793 TATCTGCAACAAATTCAATATATTATTTCATCATATTAGAATTCATACCAATTAATTCTA 29734 Query 49853 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATC 49912 ||| | ||| || ||| |||||||| |||||| || ||| || || || Sbjct 29733 CTGATAAAGCTTCACTAATAAATTCTTTTTCAATTTCAACAGCAGATGAAATTATTTCAT 29674 Query 49913 TAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGC 49972 || ||| | ||| | || | ||||||||| | | | ||| ||||| || Sbjct 29673 GAATTCTTTAATTACTTAATTTATTGATTAAATGTTTGTAAAGTAGACAAGCGAAGTCTG 29614 Query 49973 AGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 50032 || ||||| || ||||| ||||| ||| || ||||| |||||||| ||||| | Sbjct 29613 TATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAATGTGAGTCCAGGCATCAATG 29554 Query 50033 CACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTG 50092 | ||||| | ||| || |||| |||||| ||||||||||| || ||||| || | Sbjct 29553 ATCTTTTTTTTATCCAGAAAATGGCACAAAATGAACCAGAAAAGAATATACCTTCAACAG 29494 Query 50093 CGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCC 50152 ||||| |||| | ||| || || | | | |||| ||||| || ||||| Sbjct 29493 AAGCAAAAGCAATTAATCTTTCAGCAAATGAATCATTATCATTAATCCATTTCATAGCCC 29434 Query 50153 AATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttttt 50212 | |||||||||| || | ||||| | || || |||| || ||||| ||||||| Sbjct 29433 ACATTGCCTTCTTTTGTATAACAGGCACATTATCAATAGCATGAAGTAGATAATTTTTTT 29374 Query 50213 CATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTT 50272 |||| ||| | | |||||||| ||||| || ||| |||| |||||||| || | Sbjct 29373 CATTTTCATCAGTTATGTAAGTATCAATCAATAGTGAATAGGTTTCTGAATGAATATTCT 29314 Query 50273 CAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAA 50332 | || || | || |||||| |||||||||||||| || | || | ||||||||||||| Sbjct 29313 CCATAGCTAACTAAAATCCATAGAAACATCTAGCTTCTGGAACTTAAACTTCTGTACAAA 29254 Query 50333 ATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 50392 || || ||| || ||||||||||| || || ||||| |||||||| || || | ||||| Sbjct 29253 ATTATTAAGCCAAGTTTTCATTCACAATACCATCACTAGCTGCAAAGAAGGCAAGTACAT 29194 Query 50393 GTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATAT--------- 50443 || |||||||| ||||| | | || ||||| | |||||| || | || Sbjct 29193 ACTTAATAAAATGCTTTTCATCTGAGGTAAGTTTTTCCCAATCTTTAAGATCCTAAAATT 29134 Query 50444 --------------------CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 ||| | ||| ||||| |||||| ||||||| || ||| Sbjct 29133 TTATTACTTTTATTATCTTACTTAATATAAATCTATTTCTTCAGCTGTCCAGAAACTTGC 29074 Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 | | ||||||||||||||| || |||| |||| ||||| || | |||||||| Sbjct 29073 TTTATGTTATTTATACATATTCCAAATATCATTGTATTTAATTGGAAAGAGTACAAATCT 29014 Query 50544 ATTTGGATTTGGT 50556 ||||||||||||| Sbjct 29013 ATTTGGATTTGGT 29001 >seq25 Length=399112 Score = 389 bits (430), Expect = 6e-103 Identities = 672/976 (69%), Gaps = 39/976 (4%) Strand=Plus/Minus Query 49616 AAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTG---AGACATAACTCCCATTTTTT 49672 |||||||| |||| | || ||| ||||||| || | ||||||||| ||||| Sbjct 189061 AAAAGTCAGCATCCATAGTAAATACTTTATCTTATTTTTTACTCATAACTCCAGCTTTTT 189002 Query 49673 GGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCA 49732 |||| || || || | | ||||||| ||||||||||| |||| || || || | |||| Sbjct 189001 GGTAATCTCCAACTCTTCTTTCGAAGAAATTAGTTTTACCTTATAAGGAGATCATATCCA 188942 Query 49733 TGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATC 49792 | | ||||| ||||| | |||||||||||| | ||| ||| || | || |||| Sbjct 188941 TCCATTCAAAAGGATTCTTTGAATTATAAATTTTAGGAGCTCCTAATGCAAATATTAATC 188882 Query 49793 TATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAA 49852 |||| || |||||||| |||||| |||||| | | | |||||||||| || | || || Sbjct 188881 TATCTGCTACAAATTCAATATATTATTTCATTAAATTAGAATTCATTCCAATTAATTCAA 188822 Query 49853 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG-AT 49911 |||| ||||| || | | |||||||| |||||| || ||| || ||||| || Sbjct 188821 CTGGTAGAGCTTCACTGATAAATTCTTTTTCAATTTCAACAGCAGATGAAATAATTTCAT 188762 Query 49912 CTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCG 49971 | ||| || ||| | || | ||||||||| | | | ||| ||||| || Sbjct 188761 GAATTCGTTAATT-ACTTAATTTATTAACTAAATGTTTGTAAAGAAGACAAGCGAAGTCT 188703 Query 49972 CAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGG 50031 || ||||| || ||||| ||||| ||| || ||||| |||||||| ||||| | Sbjct 188702 GTATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAAGGTGAGTCCAGGCATCAAT 188643 Query 50032 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACT 50091 | ||||| | ||||||||| | |||||| ||||||||||| || ||||| || Sbjct 188642 GATCTTTTTTTGATCCAAAATATAGCACAAAATGAACCAGAAAAGAAAATGCCTTCAACA 188583 Query 50092 GCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCC 50151 | |||||||||| | ||| || || | | | | || ||||| || ||| Sbjct 188582 GAAGCAAAGGCAATTAATCTTTCAGCAAATGAATCATTATTATTAATCCATTTCATTGCC 188523 Query 50152 CAATCGGCCTTCTTTT---TTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 50208 || || ||||||| ||||| |||| | ||||| |||| | ||||||||| Sbjct 188522 CACATTGCTTTCTTTTAAATTACA---GGCACATTATCTATAGCATGGAGAAGATAGTTT 188466 Query 50209 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 50268 |||||||| ||| | | ||| ||||| |||||||| ||| |||| |||||||| Sbjct 188465 TTTTCATTTTCATCAGTTATATAGGTATCAATCAAAAGTGAATATGTTTCAGAATGAATA 188406 Query 50269 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 50328 || || || ||||| | |||||| || ||||||||||| || | || || ||||||||| Sbjct 188405 TTCTCCATAGCCATTTAAAATCCATAAAAACATCTAGCTTCAGGAACTTGTACTTCTGTA 188346 Query 50329 CAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 50388 || ||| || ||| || |||||||| ||||| || ||||| |||||||| || || | Sbjct 188345 CAGAATTATTAAGCCAAGTTTTCATTTACTATACCATCACTTGCTGCAAAGAAAGCAAGG 188286 Query 50389 ACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATC---- 50444 |||| || ||||| || ||||| | | || ||||| | |||||| || | ||| Sbjct 188285 ACATACTTAATAAAGTGCTTTTCATCTGAGGTGAGTTTTTCCCAATCTTTAAGATCCTAA 188226 Query 50445 ---TTTA-------GATAT--------------ATCTACTTCTTCCACTGTCCAAAATGA 50480 |||| |||| ||||| |||||| ||||||| || Sbjct 188225 AATTTTATTACTTTAATATAATACCTAATACAAATCTATTTCTTCAGCTGTCCAGAAACT 188166 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||| | | |||||||||||||| || |||| ||||| |||||| || | ||||| Sbjct 188165 TGCTTTATGTTACTTATACATATTCCAAATATCATTATATTTGATTGGAAAGAGTACAAA 188106 Query 50541 TCTATTTGGATTTGGT 50556 |||||| || ||| || Sbjct 188105 TCTATTAGGGTTTTGT 188090 >seq379 Length=55362 Score = 338 bits (374), Expect = 9e-88 Identities = 1162/1785 (65%), Gaps = 39/1785 (2%) Strand=Plus/Plus Query 78793 TAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGAT 78852 |||||||||||| |||| ||| || | | || ||||| ||||||||||| | ||| Sbjct 3755 TAGAAATGCATAGATGTTACTTTAGACATATTTGGTTCTGCCATATGGATATTTAAGGAT 3814 Query 78853 TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA 78912 ||||| | ||| || || | | || | |||| |||| || | ||||| ||| Sbjct 3815 TGACTCTAATCAATAAATGGAGCTCTAGAAGTTGCCAAATTTAATATAG-CTTTTTAGGA 3873 Query 78913 -ATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTG 78968 || ||||||| ||||||||| | | || |||| | |||| | | |||||| Sbjct 3874 TATCTCCCAAACAGTTTTATATAATGATTTGATATTATTAGGAATTTCTTCTATATTCTA 3933 Query 78969 AATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTC 79028 | || ||| || || | |||||||||| | ||||||| ||| || Sbjct 3934 GACAGAACCATTATTCATTATTAATTTATTCTTGATTTGAGGTGTCCATAAATTTAATTC 3993 Query 79029 GGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG-AAATTCTCCAGACAATACTCTCC 79087 ||||| | || | ||| ||||| | ||| ||||||||||| ||| ||||| | Sbjct 3994 AATTAAATCATCAACTAAATGAGGATTGA-TACACACAAATTCTCCAGCCAAAACTCTTC 4052 Query 79088 GAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAG 79147 || || |||||| | ||||||||||| | |||||||||||| | ||||| | | Sbjct 4053 TTGTATAGATATTAGTTGTATATGGTTCAAATGATTCATTATTTTAAAGAATTTAACTTG 4112 Query 79148 TTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTT 79207 ||||||| |||||||||||||| | |||||| |||||| | || ||| | | || | Sbjct 4113 TTGATGCTGTTGGCATAGGTGCAATTAATAAAGAATTTCTCATTCCATATTTTATTATAT 4172 Query 79208 TATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATT 79267 | | ||| |||| | |||||| | | | | | ||| | ||| | |||| ||| Sbjct 4173 TCTATTTGAGAGTATTCCAATCATATAATTTTGGAGTTACACC---CCACATATCAAATT 4229 Query 79268 GTAGAATACCGTTACTA-GC-GTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTC 79325 | ||| || ||| | || | | | ||||| | |||||||||||||| || | Sbjct 4230 ACAAAATTCC-TTATGATGCTGGACTA-CCTGTAAAAGTTTCATAAGGTCCAAATTTCTA 4287 Query 79326 GGCTAATTCACAACTCGCCTCTAA--TGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383 ||||||||| || || ||| ||| || ||||| || ||||| |||||||| | Sbjct 4288 TGCTAATTCAAAAGAT--CTTTAACATGCCCCATAATAGATAGTTTCAAAAATCTTAGCA 4345 Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATA-AACGCGTCTGC 79442 || | ||| || ||| ||||||||| || ||| | || || || ||||| Sbjct 4346 TTCAATTCTAAGGCATCTTCTGAATCAAATGG-TATTTTCATTCTTTATAATGCATCTGC 4404 Query 79443 TAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGG 79502 || |||| || || || || |||||||||||||| |||||| ||| |||| | Sbjct 4405 AAAACCTTAGACTCCTATTCCAATAGGTCTATGTCTTTTATTACTGTATTCTGCTTATTT 4464 Query 79503 AATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCAC 79562 || |||||| | || | ||| || | | |||| ||||| | |||| ||| | Sbjct 4465 AACTGGATAAAAGTTCAAATCAATTACTATATTAAGATTTGTCGTGATTAATTTAGTAAT 4524 Query 79563 ATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATT---ACAAACATGTTCAACGCGAC 79619 ||| | || ||||||||| | |||| | | ||| | | || | Sbjct 4525 CTCCAACAATTAATCAAAATCAAAAGTTTTATCTTCTTTGATTAACTTTTATAAATTAAT 4584 Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 | || ||||||||||| || | |||| | | | ||| || |||||||| || Sbjct 4585 ACTAGCAAGATTACAAACAGCAATTTCATCTGGTGATGTAAATTAGATAATTTCAGTACA 4644 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 || ||||||| || || || |||| ||| | ||||||||| || | || || ||||| Sbjct 4645 TAGATTACTACTTTTTATTGTACCTAGATTCTTTTGATTACTTTTCTAATTGCAAGCATC 4704 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 ||||| | || | || |||||| || |||| || ||||| ||| ||| | Sbjct 4705 TTTATATAACATATATGGTAATCCAGTTGATATTTGAGCATCAATAATTTCTTACCATAA 4764 Query 79800 GACTCGAGCCTTTATTATAGACTTGTATC--TCTTTTCTCTTTCGTATTGTGTATATAAT 79857 || |||||| ||| || ||| || | | |||| | ||| |||| | || ||| Sbjct 4765 TTGTCTAGCCTTCATTGTA-ACTC-TACCCATATTTTTTGATTCATATTCAATGTACAAT 4822 Query 79858 CGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAAC 79917 | ||| || | || || ||| | | || |||||||| | ||||||||||| Sbjct 4823 TTGTTGAATTCTTAACCATAACAATCTTAAAGACCTGGACATTCATTTGGACACATCAAA 4882 Query 79918 GACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 79977 | ||| ||| |||||| ||||||| || |||||| | ||| || ||||| | | ||| | Sbjct 4883 GTCCAATCTGAATCATCTTTTACTCTTTACATAAATAAATCTGGTATCCATAAACCTAAA 4942 Query 79978 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 80037 |||| |||||| | ||| | || || |||| ||||||| | | | | ||| Sbjct 4943 AATAAATCTCTTGCTCTCTATTCTTCAATTCCATGATTCTTTCTCAATTATAAGAAACTT 5002 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 ||||||||| |||||| ||||| | || || || | ||| || ||| ||| Sbjct 5003 ATAATATCACTATGCCATGGTTCTATATAAATAGCAAATGATCCTTTTCTTTTACCACCT 5062 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 || | ||||| ||||| || || | |||| | || ||||||| || | | ||||||| Sbjct 5063 CCTTAATCTACATATCTTGCTGTATCATTAAACACCTTCAACATAGGCACTAAACCATTG 5122 Query 80158 GATGTACCATTGGTCCCGGAGATATAGCT-TCCACTGGCACGAATATTACTA-ATTGATA 80215 | | ||||| || || ||||| || || || || || || | | || Sbjct 5123 CTTATTCCATTTGTTCCTCTAATATAACTATCTTATGATCTGATCTTTGATACACT--TA 5180 Query 80216 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 80275 |||||||| || || ||| ||||| || |||| || | || ||||| || | Sbjct 5181 ATCCTATTCCTCCAGCTGACTTACTGATTAGAGCACATCTCTTGAGAGTCTCATATATAC 5240 Query 80276 CCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 80335 | ||||| |||||||| ||| | | ||||||||| ||||||| || | | Sbjct 5241 CTTCTATTGAATCATCAACCATATCCAATAGAAAACATGATGACATTTAAGGATAAGGTG 5300 Query 80336 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT 80395 | || |||||||| || || | || || || || | |||| ||||| || || || Sbjct 5301 TGCCACTGTTAAATAATGTTGGTGTGGCATGAGTGAAGTACTTTTAAGACATTAAATGGT 5360 Query 80396 ACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACA 80455 | || | || ||||||| | |||| || |||||| || | ||| | ||| || | Sbjct 5361 AGGTTTAAAAGGCTGATTGAAGATCCTCTTTATGAATACCAATACTGACTCTCATCAATA 5420 Query 80456 TGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTA---AGATT-TTTCC 80511 | | |||||||| | | ||| ||| ||| ||||| || || | || Sbjct 5421 ATTATTATGGTCTTTCTA----TTGGTTTTTTTCCTTCCTTAAGTAAATAGCTTCTCTCT 5476 Query 80512 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 80556 ||||| ||||| |||||| ||| ||| | | ||||| || ||| Sbjct 5477 AAAGTCTTAAAGCCAAAAAAGTCATATTGATAATCTCGATCATAA 5521 >seq504 Length=36300 Score = 149 bits (164), Expect = 9e-31 Identities = 764/1199 (64%), Gaps = 32/1199 (3%) Strand=Plus/Minus Query 79349 ATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTAT 79408 |||| || || ||||| ||||| || || || ||| | ||| ||| ||| || Sbjct 32504 ATGCCCCATAGTAAATTGTTTCAAAGATTTTTGCATTCAATTCTAATGCATCTTCTGAAT 32445 Query 79409 CAAATGGATAATTTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATA 79467 ||||||| || ||| | || || || ||||| ||||||| || ||||| | || Sbjct 32444 CAAATGG-TATTTTCATTCTTTATAATGCATCTGCAAATCCTTAGACTCCAATTTCAATT 32386 Query 79468 GGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 79527 ||||||| ||| |||||| ||| |||| | || ||||||| | || | ||| || Sbjct 32385 GGTCTATTTCTTTTATTACTGTATTCTGCTTATTTAACAGGATAAAAGTTCAAATCAATG 32326 Query 79528 ATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 79587 || |||| ||||| | ||||| |||| | || | ||| ||||||||| Sbjct 32325 ATGATATTAAGATTTATTGTTATTATTTTGTT-ATTTCTAACAATTTATCAAAATCAAAA 32267 Query 79588 CGTCCA----TCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTAC 79643 ||| | ||| | | ||| | | ||| | | || ||||||||||| || | Sbjct 32266 -GTCTAATCTTCTTTGATTAACTTTTACAAATTAATACTAGCAAGATTACAAACAGCAAT 32208 Query 79644 CTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCC 79703 |||| | | | ||| || ||||||||||| || ||||||| ||||| ||||| Sbjct 32207 TTCATCTGGTGATGTAAATTAAATAATTTCAGTGCATAGATTACTACTTTTAATAGTTCC 32148 Query 79704 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACC 79763 | || | ||||||||| || ||||| ||| | ||||| | || | || || Sbjct 32147 AAGGTTCTTTTGATTACTTTTCGAATTACAAGCAACTTTATATAACATATAAGGTAATCC 32088 Query 79764 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTT 79823 |||| || |||| || ||||| ||| ||| | | ||| || ||| | ||| Sbjct 32087 AGTTGATATTTGAGCATCAATAATTTCTTACCATAATTGTTTAGCTTTCATTGTC-ACTC 32029 Query 79824 GTATC--TCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || | | |||| | || |||| ||| ||| | ||| || | || || | Sbjct 32028 -TACCCATATTTTTTGATTTATATTCAAAATACAATTTGTTGAATTCTTACCCATAACAA 31970 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 || | | || |||||||| | ||||||||||| | ||| ||| |||||| |||||| Sbjct 31969 TCCTAAAGACCTGGACATTCATTTGGACACATCAATGTCCAATCTGAATCATCTTTTACT 31910 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 | || ||| | ||| || ||||| | | ||| ||||| |||||| | ||| | || Sbjct 31909 CTTTACATTA----ATCTGGTATCCATAAACCTAAAAATAAATCTCTTGCTCTCTATTCT 31854 Query 80002 T-CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 80060 | ||| || ||||||| | | | | ||| ||||||||| |||||| ||||| Sbjct 31853 TAAATTTAATG-ATTCTTTCTCAATTATAAGAAACTTATAATATCACTATGCCATGGTTC 31795 Query 80061 CAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 80120 | || || || | ||| || |||| ||||| | ||||| ||||| || || Sbjct 31794 AATATAAATAGCAAATGATCCTTTTCTTTTGCCACCTCCTTAATCTACATATCTTGCTGT 31735 Query 80121 GTTATTATAAACTCTCAACATTG-GAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179 |||| | || | ||||| | ||||| |||||| | | | ||| || || | Sbjct 31734 ACCATTAAACACCTTTAACATAGACAATAA-ACCATTACTTATTCTATTAGTTCCTCTTA 31676 Query 80180 TATAGCTTCCACTGGCACGAATATTACTA-ATTGATAGACCTATTCCCCCTGCCATTTTA 80238 || | || || || || || | | ||| |||||||| || || || Sbjct 31675 TAAACTATCTTATGATCTGATCTTTGATACACT--TAGTCCTATTCCTCCAGCTGACTTG 31618 Query 80239 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATG 80298 |||| | |||| || | || ||| | || || || || |||||||| ||| Sbjct 31617 CTAATTAGAACACATCTCTTGAGAGTCTCAAATATACCTTCGATTGAATCATCAACCATA 31558 Query 80299 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 80358 | | ||||||||| ||||||| || | ||| ||| | | ||||| ||||| Sbjct 31557 TCCAATAGAAAACATGATGACATTTAAGGATAAGGAGTGCCCACTGTTAATAATGTAGGT 31498 Query 80359 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 80418 | || || || || |||| | ||||| || || || || | || ||||||| | | Sbjct 31497 GTGGCATGAGTGAAGTATTTCTAAGACATTAAATGATAGGTTTAAAAGGCTGATTTGAGA 31438 Query 80419 TCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 80478 | || | |||| || | ||| | |||||| | | | |||||||| | Sbjct 31437 TTATCTTTAAGAATACCAATACTGACTCTCATTAATAATTATTATGGTCTTTCGA----- 31383 Query 80479 TTGTTATTTATTTTCAACAAGTA---AGATT-TTTCCAAAGTTTTAAAACCAAAATAGT 80533 ||| | ||| ||| ||||| || || |||| ||||||||||| |||||| ||| Sbjct 31382 TTGGTTTTTCCCTTCCTTAAGTAAATAGCTTCTTTCTAAAGTTTTAAAGCCAAAAAAGT 31324 >seq124 Length=157641 Score = 96.9 bits (106), Expect = 5e-15 Identities = 112/149 (75%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 97725 ATTGTTGAATTCTGTGAGCGTATGGCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTT 97784 ||||||||||| ||||| |||||||| ||| |||||||| ||||| || || ||| Sbjct 99590 ATTGTTGAATTTAGTGAGGCAATGGCAAATTTAGGGAAAATAGTAATAGTTGCAGCTCTT 99649 Query 97785 GATGGGACATTTCAACGTAAACCGTTTAATAATATCTTGAATCTTATTCCATTATCTGAA 97844 ||||| |||||| | | || || ||| |||||| |||| | | |||||||| ||||| Sbjct 99650 GATGGTACATTTGATAGAAAGCCTTTTCGTAATATTTTGAGTTTGATTCCATTGGCTGAA 99709 Query 97845 ATGGTGGTA--AAACTAACTGCTGTGTGT 97871 || || ||| |||||||||| ||| Sbjct 99710 --CGTATTACTAAATTAACTGCTGTTTGT 99736 >seq62 Length=244018 Score = 96.9 bits (106), Expect = 5e-15 Identities = 112/149 (75%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 97725 ATTGTTGAATTCTGTGAGCGTATGGCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTT 97784 ||||||||||| |||| |||||||| || |||||||| || || || |||||| Sbjct 168032 ATTGTTGAATTTAGTGAAGCAATGGCAAATTTGGGGAAAATAGTAATTGTTGCAGCACTT 167973 Query 97785 GATGGGACATTTCAACGTAAACCGTTTAATAATATCTTGAATCTTATTCCATTATCTGAA 97844 ||||| |||||| | | ||||| ||| ||||||||||| | | |||||||| ||||| Sbjct 167972 GATGGTACATTTGATAGAAAACCATTTCGTAATATCTTGAGTTTGATTCCATTGGCTGAA 167913 Query 97845 ATGGTGGTA--AAACTAACTGCTGTGTGT 97871 || || ||| |||||||||| ||| Sbjct 167912 --CGTATTACTAAATTAACTGCTGTTTGT 167886 >seq33 Length=369673 Score = 89.7 bits (98), Expect = 7e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 97725 ATTGTTGAATTCTGTGAGCGTATGGCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTT 97784 ||||| ||||| |||| |||||||| |||||| || || ||||| || |||||| Sbjct 257827 ATTGTAGAATTTAGTGAAAAGATGGCAAATTTAGGAAAGATTGTAATAGTTGCAGCACTT 257886 Query 97785 GATGGGACATTTCAACGTAAACCGTTTAATAATATCTTGAATCTTATTCCATTATCTGAA 97844 ||||| || ||| | | ||||| ||| |||| ||||| ||| | ||||| || ||||| Sbjct 257887 GATGGAACCTTTGACAGGAAACCTTTTCATAACATCTTAAATTTGATTCCTTTGGCTGAA 257946 Query 97845 ATGGTGGTAAAACTAACTGCTGTGTGT 97871 | ||||||||| ||||| ||| Sbjct 257947 CGTATAACAAAACTAACAGCTGTATGT 257973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718247736767440