Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq114 91.5 1e-13 >seq114 Length=165420 Score = 91.5 bits (100), Expect = 1e-13 Identities = 176/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 19961 TTAAATATATTTTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCT 20020 |||| ||| |||| |||| || |||| ||| ||||| || ||||| || || ||||| Sbjct 163544 TTAATAATAATTTA-CATT--CCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCC 163600 Query 20021 TTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATA 20080 |||| ||||| ||||| | ||| | |||||| |||| || || ||| |||| Sbjct 163601 TTTTAAATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATG 163660 Query 20081 AGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCA 20140 || || | || ||| || | ||||| ||||| |||||| || || | || Sbjct 163661 AGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCA 163720 Query 20141 ACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200 | || || ||||| || | || |||||||| ||||| || ||||| |||||| Sbjct 163721 ATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTACCGGTTAATGTTTTAACAAAA 163780 Query 20201 ATTTGCAT-TTTTAAA 20215 |||||||| |||||| Sbjct 163781 ATTTGCATAGTTTAAA 163796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419575203215226