Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq253 232 2e-55 seq25 215 1e-50 seq56 170 4e-37 seq128 163 7e-35 seq13 158 3e-33 seq114 149 1e-30 seq112 149 1e-30 seq563 91.5 3e-13 >seq253 Length=82967 Score = 232 bits (256), Expect = 2e-55 Identities = 512/757 (68%), Gaps = 12/757 (2%) Strand=Plus/Plus Query 268801 CTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGC 268860 ||||| ||||||| |||| | | |||| |||| ||||| ||| | ||||| Sbjct 29145 CTTAA-AGATTGGGAAAAACTTACCTCAGATGAAAAGCATTTTATTAAGTATGTACTTGC 29203 Query 268861 GTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGA 268920 || ||||||| |||||||||||| || || ||||| | | | | || ||| ||| Sbjct 29204 CTTCTTTGCAGCTAGTGATGGTATTGTGAATGAAAACTTGGCTTAATAATTTTGTACAGA 29263 Query 268921 GGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCA 268980 || | |||| ||||| |||||||| || ||||| || ||||||| || |||||||| Sbjct 29264 AGTTTAAGTTCCAGAAGCTAGATGTTTCTATGGATTTTAGTTAGCTATGGAGAATATTCA 29323 Query 268981 TTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAG 269040 |||||| | || ||||| || |||||||| ||| |||| | || ||||| || Sbjct 29324 TTCAGAAACCTATTCACTATTGATTGATACTTACATAACTGATGAAAATGAAAAAAATTA 29383 Query 269041 ACTATTTTCTTCTA-TGAGAACTATGGACTGTGTGAGaaaa-aaaTCTGAATGGGCTCTG 269098 ||| || | ||| ||| || | | | |||| | |||| || | |||||| || Sbjct 29384 TCTACTTCATGCTATTGATAA-TGT-GCCTGTTATACAAAAGAAGGCAATGTGGGCTATG 29441 Query 269099 AAATGGATAAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAA 269158 |||||||| || |||| | | | | ||||| ||| |||||||||| |||| ||| Sbjct 29442 AAATGGATTAATGATAATGATTCATTTGCTGAAAGATTAATTGCTTTTGCTTCTGTTGAA 29501 Query 269159 GGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATG 269218 |||||||||||||| || || ||| || || || ||| | || |||||| | ||| Sbjct 29502 GGTATATTCTTTTCTGGTTCATTTTGTGCCATTTTCTGGATAAAAAAAAGATCATTGATG 29561 Query 269219 CCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTC 269278 || ||| | || || || || ||||| || || || |||||| | || |||||| Sbjct 29562 CCTGGACTCACATTTTCAAATGAATTAATTTCAAGAGATGAAGGTCTTCATACAGACTTC 29621 Query 269279 GCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAA 269338 |||||| || ||||| || | ||| | ||| | | | ||| | | ||| Sbjct 29622 GCTTGTCTA--CTTTACAAACATTTAATCA-ATAAATTAAGTAATTAAAGAATTCATGAA 29678 Query 269339 ATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGAT 269398 || || || |||||| | |||| ||||||| | | |||||| |||| | || Sbjct 29679 ATAATTTCATCTGCTGTTGAAATTGAAAAAGAATTTATTAGTGAAGCTTTATCAGTAGAA 29738 Query 269399 CTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTG 269458 | || ||||||||| || ||||| | |||||||| | || || | |||||||| Sbjct 29739 TTAATTGGTATGAATTCTAATATGATGAAATAATATATTGAATTTGTTGCAGATAGATTA 29798 Query 269459 CTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAA--AATCCGTTTAGTTTTATGG 269516 | | | ||||| | ||||| ||||| || || ||||| ||| | |||| Sbjct 29799 ATATTTGCATTAGGAGCTCCTAAAATTTATAA--TTCAAAGAATCCTTTTGAATGGATGG 29856 Query 269517 AGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGA 269553 | | ||||| ||| ||||||| ||||||| ||||| Sbjct 29857 ATATGATATCTTTACAAGGTAAAACTAATTTTTTCGA 29893 >seq25 Length=399112 Score = 215 bits (238), Expect = 1e-50 Identities = 557/838 (66%), Gaps = 18/838 (2%) Strand=Plus/Plus Query 268801 CTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGC 268860 ||||| ||||||| |||| | | |||| |||| ||||| ||| | ||||| Sbjct 188233 CTTAA-AGATTGGGAAAAACTCACCTCAGATGAAAAGCACTTTATTAAGTATGTCCTTGC 188291 Query 268861 GTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGA 268920 || ||||||| ||||||||||| || || ||||| | | | | |||||| ||| Sbjct 188292 TTTCTTTGCAGCAAGTGATGGTATAGTAAATGAAAACTTGGCTTAATAATTCTGTACAGA 188351 Query 268921 GGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCA 268980 ||||| |||||||||| ||||||||||| ||||| | || ||||| || |||||||| Sbjct 188352 AGTACAAGTTCCTGAAGCTAGATGTTTTTATGGATTTTAAATGGCTATGGAGAATATTCA 188411 Query 268981 TTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAG 269040 ||| || | || || || || ||||| |||||| |||| | || || |||| Sbjct 188412 TTCTGAAACATATTCACTTTTGATTGATACCTATATAACTGATGAAAATGA----AAAAA 188467 Query 269041 ACTATTTTCTTCTATGAGA---ACTATG-GACTGT-GTGAGaaaaaaaTCTGAATGGGCT 269095 ||||| ||| || ||| | | ||| | |||| | ||| ||| | ||||| Sbjct 188468 ACTATCTTC-TCCATGCTATAGATAATGTGCCTGTAATTTAAAAGAAAGCAATGTGGGCA 188526 Query 269096 CTGAAATGGATAAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTA 269155 |||||||||| || ||| | | | | ||||| ||| |||| ||||| |||| Sbjct 188527 ATGAAATGGATTAATAATAATGATTCATTTGCTGAAAGATTAATTGCCTTTGCTTCTGTT 188586 Query 269156 GAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTT 269215 ||||| || |||||||| || || ||| ||||| |||||| | || |||||| | Sbjct 188587 GAAGGCATTTTCTTTTCTGGTTCATTTTGTGCTATATTTTGGATCAAAAAAAGATCATTG 188646 Query 269216 ATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGAC 269275 ||||| ||| | || || || || ||||| || || || |||||| | || ||| Sbjct 188647 ATGCCTGGACTCACCTTTTCAAATGAATTAATTTCAAGAGATGAAGGTCTTCATACAGAC 188706 Query 269276 TTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATAC 269335 |||||||| | || ||||| || || | | ||| | | | || | | Sbjct 188707 TTCGCTTG--TCTTCTTTAC-AAACATTTAGTTAATAAATTAAGTAATTAACGAATTCAT 188763 Query 269336 GAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATC 269395 |||||||| || |||||| | |||| ||||||| | | ||||||||| | | Sbjct 188764 GAAATTATTTCATCTGCTGTTGAAATTGAAAAAGAATTTATCAGTGAAGCTCTACCAGTT 188823 Query 269396 GATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGA 269455 || | || || |||||| || | |||| | |||||||| | || ||| | |||||| Sbjct 188824 GAATTAATTGGAATGAATTCTAATTTAATGAAATAATATATTGAATTTGTAGCAGATAGA 188883 Query 269456 TTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAA--AATCCGTTTAGTTTTA 269513 || | | | ||||| | ||||| ||||| || || ||||| ||| | | Sbjct 188884 TTAATATTTGCATTAGGAGCTCCTAAAATTTATAA--TTCAAAGAATCCTTTTGAATGGA 188941 Query 269514 TGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATC 269573 |||| | || || ||| ||||||| ||||||||||||| | | || | | || | Sbjct 188942 TGGATATGATCTCCTTATAAGGTAAAACTAATTTCTTCGAAAGAAGAGTTGGAGATTACC 189001 Query 269574 AGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATTTTCACTACAGATGCAGAATT 269631 | ||| || || ||| || ||| |||| || | || |||| ||||| || || Sbjct 189002 AAAAAGCTGGAGTTATGAGTAAAAAATAAGATAAAGTATTTACTATGGATGCTGACTT 189059 >seq56 Length=265680 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | ||||| ||| | || |||||||| | ||| ||||| || || Sbjct 113496 CCTCCTCTTAATCTCAATACTAAATGAAGAGTTGATTCTTTTTAAATGTTATAATCTGAA 113437 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || ||||| ||||| ||||| |||||||| | || | |||||||||||| Sbjct 113436 AGAGTTCTTCCATCTTCAAGTTGCTTTCCTGCAAAAATCAATCTTTATTGATCAGGAGGA 113377 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||||||||| | |||||| || || ||| || | ||| || ||||||||| Sbjct 113376 ATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATGGTGTCTGAAGGTTCTACA 113317 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| |||||||| || || | ||||| ||||| || | ||| Sbjct 113316 TCAAGTGTGATAGTCTTTCCCGTCAAGGTTTTAACAAAAATTTACAT 113270 >seq128 Length=150569 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || |||||||| || | ||||| ||| | || |||||||| | ||||||||| || || Sbjct 58062 CCACCTCTTAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTAAATATTATAATCTGAA 58003 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || ||||| ||||| ||||| |||||||| | || | || |||||| || Sbjct 58002 AGAGTTCTTCCATCTTCGAGTTGCTTTCCTGCAAAAATCAATCTTTATTAATCAGGTGGA 57943 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||||||||| | |||||| || || ||| || | ||||| ||| ||||| Sbjct 57942 ATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATTGTATCTGAAGGCTCTACA 57883 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || ||||| || || || ||||| ||||| || | ||| || Sbjct 57882 TCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACATATT 57833 >seq13 Length=521119 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || | ||||| ||| | ||| |||||||| | ||| ||||| ||||| Sbjct 46020 CCTCCTCTGAGTCTCAATACTAAATGAAGTGTTGATTCTTTTTAAATGTTATAATCAGAA 46079 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || || |||| || |||||||||||||||| || | || ||||||||| Sbjct 46080 AGAGTTCTTCCATCCTCTAATTACTTTCCAGCAAAAATTAATCTTTATTAATCAGGAGGG 46139 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 ||||||||||| || | |||||||| || ||| || | |||||| || || || Sbjct 46140 ATTCCTTCTTTGTCTTAGATCTTTGCCTTAACAGCATCGATGGTATCCGATGGCTCAACA 46199 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || ||||| || ||||| || || || || || ||||| || | ||| || Sbjct 46200 TCAAGTGTGATGGTCTTGCCTGTGAGGGTCTTAACAAAAATTTACATATT 46249 >seq114 Length=165420 Score = 149 bits (164), Expect = 1e-30 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||||| || | |||| ||| | || ||||| || | ||| ||||| || Sbjct 164280 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATCT 164339 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||||| || |||||| |||||||| || || | || |||||| Sbjct 164340 GAAAGTGTTCTTCCATCTTCTAATTATTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 164399 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || || || ||| || | || || ||||| Sbjct 164400 GGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCA 164459 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTT 104561 || || || || |||||||| ||||| | ||||||||||||||| | ||||| Sbjct 164460 ACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATTT 164511 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||||| || | |||| ||| | || ||||| || | ||||||||| || Sbjct 153367 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATATTATAATCT 153308 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||||| || ||||| |||||||| || || | || |||||| Sbjct 153307 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 153248 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || | ||| || || || ||| |||| || || |||||| Sbjct 153247 GGAATTCCTTCTTTGTCTTAAATTTTAGCCTTGACAGCATCTATAGTGTCTGATGGTTCT 153188 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || |||||||| | |||||| ||||| || | ||| Sbjct 153187 ACATCAAGAGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTACAT 153138 Score = 134 bits (148), Expect = 3e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || | ||| ||||| || || || ||||| || ||||||| || |||||| Sbjct 165110 GTTGATTCCTTTTAAATGTTATAATCTGAAAGTGTTCTTCCATCTTCTAATTATTTTCCT 165169 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || || | || |||||| || |||||||| || || | ||| || || || Sbjct 165170 GCAAAAATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTG 165229 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||| || | || || ||||| || || || || |||||||| ||||| | |||| Sbjct 165230 ACAGCGTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATAGTCTTTCCAGTTAATGTT 165289 Query 104543 TTTACAAATATCTGCATTT 104561 ||||||||||| | ||||| Sbjct 165290 TTTACAAATATTTACATTT 165308 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 104377 AATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCT 104436 |||||||||||| || | || ||| | | || || ||||| ||| |||||||| || || Sbjct 144751 AATATTATAGTCTGAGATTGTCCTATCATGTTATAATTGTTATCCTGCAAAAATGAGTCT 144692 Query 104437 CTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGT 104496 | || |||||| || |||||||| || || | ||| || | || ||| | || | || Sbjct 144691 TTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAACCTTGACAGTGTCAATAGT 144632 Query 104497 ATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553 || ||||| || || || || || || ||||| | ||||||||||||||| Sbjct 144631 GTCTAATGGTTCAACACAAAGAGTGATGGTTTTTCCAGTTAATGTTTTTACAAATAT 144575 >seq112 Length=167324 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || | ||||| ||| | || |||||||| | |||||||| || || Sbjct 45498 CCTCCTCTGAGTCTCAATACTAAATGGAGAGTTGATTCTTTTTAGATATTATAATCTGAA 45439 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || || || | ||| |||||||||||||||| || | || ||| ||||| Sbjct 45438 AGAGTTCTTCCATCCTCCAATTGCTTTCCAGCAAAAATTAATCTTTATTAATCGGGAGGG 45379 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||| || |||| |||||||| || ||| || | ||||| || || || Sbjct 45378 ATTCCTTCCTTGTCCTAGATCTTTGCCTTAACAGCATCGATAGTATCAGATGGCTCAACA 45319 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || ||||| || |||||||| ||||| || || ||||| || | ||| || Sbjct 45318 TCAAGTGTGATGGTCTTACCCGTAAGGGTCTTAACAAAAATTTACATATT 45269 >seq563 Length=30168 Score = 91.5 bits (100), Expect = 3e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 65729 TTCAAATATGATTTGAGCTACTCTATCGCCTTTACATATATTAAACTCCTCCTTACCGAA 65788 ||||| || |||||||| | |||||| || | | || || || || | | || || Sbjct 612 TTCAATAATCATTTGAGCAATTCTATCTCCATAATTTACTTTGAAATCGTTATCTCCAAA 671 Query 65789 ATTAAATATTAATATTCCAACATTACCTCTATAGTCTGAATCTATAACACCAGCACCTAC 65848 |||||||| ||| | | | | ||||| || ||| ||| |||||||||||||| || Sbjct 672 ATTAAATAATAAAACACATATTTCTCCTCTGTAATCTTCATCAATAACACCAGCACCAAC 731 Query 65849 ATCTATAAAGTAATTATACGCTAATCCAGATCGGGGAGCT 65888 ||||||||| | ||| ||||||||||| || |||||| Sbjct 732 ATCTATAAAATTTTTAGCTGCTAATCCAGAACGAGGAGCT 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151363791122968