Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq1370 80.6 7e-11 >seq1370 Length=2138 Score = 80.6 bits (88), Expect = 7e-11 Identities = 118/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 40894 GGCGGCGGCCACTACAAGGATATGCCCATCCAGCCGGTCGAATTCATCCACAAGAACGGC 40953 || ||| ||||||||| || | | | |||||||| || |||||| || |||| Sbjct 1143 GGAGGCTCCCACTACAAAGACAAGGCAATCCAGCCTTGGGACTTCATCGTCAGCAACGAA 1084 Query 40954 ATCGGCTATTTCGAGGGCAACGTCATCAAGTACGTGAGCCGGTGGCGGAAGAAGAACGGC 41013 | || ||| | ||||| || ||| ||||||||||| ||| | | | ||||||||| Sbjct 1083 CTGGGGTATCTGGAGGGGAATGTCGTCAAGTACGTGTCCCGCTACAAGGAAAAGAACGGC 1024 Query 41014 GTCGAGGACTTGAAAAAAGCCCGCCACTATATCGACCTGCTGATCGA 41060 | ||||| |||| || ||||| ||||| | ||| |||||| || Sbjct 1023 CTAGAGGATCTGAAGAAGGCCCGGCACTACTTGGACAAGCTGATTGA 977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135852215221660